RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 ZSWIM7Q19AV6 140 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 SBK1Q52WX2 424 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 WDR88Q6ZMY6 472 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 SNX32Q86XE0 403 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 BATF2Q8N1L9 274 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 CSNK1A1LQ8N752 337 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 MSANTD4Q8NCY6 345 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 ATP6V0A1Q93050 837 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 TADA1Q96BN2 335 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 GLT8D2Q9H1C3 349 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 RPS6KB2Q9UBS0 482 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 DUSP12Q9UNI6 340 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 PDE10AQ9Y233 779 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 RPGRIP1LQ68CZ1 1315 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 USP6P35125 1406 aa2.85□□□□□ -1.95
PALB2-203ENST00000565038 WI2-2373I1.2A0A1W2PRP0 233 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 SLC35G4P0C7Q5 338 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 OAS2P29728 719 aaKnown RBP2.84□□□□□ -1.95
PALB2-203ENST00000565038 AKT2P31751 481 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 RIPPLY3P57055 190 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 HERVK_113P63132 956 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 ERVK-8P63133 956 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 MRPS6P82932 125 aaKnown RBP2.84□□□□□ -1.95
PALB2-203ENST00000565038 UBXN1Q04323 297 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 CKAP4Q07065 602 aaKnown RBP2.84□□□□□ -1.95
PALB2-203ENST00000565038 BCL2L1Q07817 233 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 ZP4Q12836 540 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 UBE2V2Q15819 145 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 PRR4Q16378 134 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 KYAT1Q16773 422 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 IL23RQ5VWK5 629 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 WSCD1Q658N2 575 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 DMKNQ6E0U4 476 aaPredicted RBP2.84□□□□□ -1.95
PALB2-203ENST00000565038 LEG1Q6P5S2 330 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 SCARA5Q6ZMJ2 495 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 C1orf186Q6ZWK4 172 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 ZNF713Q8N859 430 aaPredicted RBP2.84□□□□□ -1.95
PALB2-203ENST00000565038 C18orf25Q96B23 403 aaPredicted RBP2.84□□□□□ -1.95
PALB2-203ENST00000565038 ATP6V0BQ99437 205 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 ERVK-6Q9BXR3 956 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 Q9H3A6 140 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 GDAP2Q9NXN4 497 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 KCNN3Q9UGI6 736 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 BCAP29Q9UHQ4 241 aa2.84□□□□□ -1.95
PALB2-203ENST00000565038 EXOSC1Q9Y3B2 195 aaKnown RBP2.84□□□□□ -1.95
PALB2-203ENST00000565038 GRIN2DO15399 1336 aa2.84□□□□□ -1.96
PALB2-203ENST00000565038 METP08581 1390 aa2.84□□□□□ -1.96
PALB2-203ENST00000565038 TTC26A0AVF1 554 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 H0YL77 283 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 WWP2O00308 870 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 PPIHO43447 177 aaKnown RBP2.83□□□□□ -1.96
PALB2-203ENST00000565038 SLC4A1P02730 911 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 CXCL10P02778 98 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 TSPAN8P19075 237 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 HLA-DPA1P20036 260 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 AHCYP23526 432 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 RPA1P27694 616 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 CDH5P33151 784 aaPredicted RBP2.83□□□□□ -1.96
PALB2-203ENST00000565038 HSPA1LP34931 641 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 HTR5AP47898 357 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 HLCSP50747 726 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 GNB2P62879 340 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 RPL32P62910 135 aaKnown RBP2.83□□□□□ -1.96
PALB2-203ENST00000565038 PLOD1Q02809 727 aaPredicted RBP2.83□□□□□ -1.96
PALB2-203ENST00000565038 DPYSQ14117 519 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 PKN2Q16513 984 aaKnown RBP2.83□□□□□ -1.96
PALB2-203ENST00000565038 CYP51A1Q16850 503 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 SLC39A4Q6P5W5 647 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 ZNF530Q6P9A1 599 aaPredicted RBP2.83□□□□□ -1.96
PALB2-203ENST00000565038 FAM159AQ6UWV7 190 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 BTNL3Q6UXE8 466 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 ZNF562Q6V9R5 426 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 TFAP2EQ6VUC0 442 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 TMEM26Q6ZUK4 368 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 TRPM8Q7Z2W7 1104 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 NET1Q7Z628 596 aaPredicted RBP2.83□□□□□ -1.96
PALB2-203ENST00000565038 TAF8Q7Z7C8 310 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 OR10H4Q8NGA5 316 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 SETD7Q8WTS6 366 aaKnown RBP2.83□□□□□ -1.96
PALB2-203ENST00000565038 MARC2Q969Z3 335 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 IMMP1LQ96LU5 166 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 ZNF285Q96NJ3 590 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 SYTL2Q9HCH5 934 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 PNO1Q9NRX1 252 aaKnown RBP2.83□□□□□ -1.96
PALB2-203ENST00000565038 NUDCQ9Y266 331 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 L3MBTL1Q9Y468 752 aa2.83□□□□□ -1.96
PALB2-203ENST00000565038 TDRD6O60522 2096 aaKnown RBP2.82□□□□□ -1.96
PALB2-203ENST00000565038 FBLL1A6NHQ2 334 aaKnown RBP2.82□□□□□ -1.96
PALB2-203ENST00000565038 B4DXG7 233 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 E9PLD3 99 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 PANO1I0J062 215 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 RTL8CO15255 209 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 EMC8O43402 210 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 ZBTB14O43829 449 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 JCHAINP01591 159 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 PRDX2P32119 198 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 NUMBP49757 651 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 SLC26A2P50443 739 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 GPC3P51654 580 aa2.82□□□□□ -1.96
PALB2-203ENST00000565038 EFNA3P52797 238 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms