RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 Q9UFV3 132 aa12.44□□□□□ -0.42
VPS9D1-204ENST00000565023 ADGRG4Q8IZF6 3080 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 C17orf51A8MQB3 221 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 KDM4EB2RXH2 506 aaPredicted RBP12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 PLOD3O60568 738 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 TSPAN2O60636 221 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 HPNP05981 417 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 CYP4B1P13584 511 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 MAPK1P28482 360 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 ASMTP46597 345 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 ZFP36L2P47974 494 aaKnown RBP12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 PRKAG1P54619 331 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 EMX2Q04743 252 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 CRYZQ08257 329 aaKnown RBP12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 DCST1Q5T197 706 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 GDF7Q7Z4P5 450 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 ULK2Q8IYT8 1036 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 LRRC34Q8IZ02 419 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 FNDC5Q8NAU1 212 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 FAM83FQ8NEG4 500 aaPredicted RBP12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 OR14L1PQ8NHC6 308 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 LILRB4Q8NHJ6 448 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 PPP1R36Q96LQ0 422 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 AMDHD1Q96NU7 426 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 C1orf50Q9BV19 199 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 NUF2Q9BZD4 464 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 UBQLN3Q9H347 655 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 REEP4Q9H6H4 257 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 AKTIPQ9H8T0 292 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 MEAF6Q9HAF1 191 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 KCNJ16Q9NPI9 418 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 INTS9Q9NV88 658 aaKnown RBP12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 C19orf53Q9UNZ5 99 aaPredicted RBP12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 PCNX3Q9H6A9 2034 aa12.43□□□□□ -0.42
VPS9D1-204ENST00000565023 F8P00451 2351 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 OR6C70A6NIJ9 312 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 SLCO1B7G3V0H7 640 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 UPK1AO00322 258 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 HDAC3O15379 428 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 ATP8B1O43520 1251 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 TBX19O60806 448 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 GABRA1P14867 456 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 BMP7P18075 431 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 POU3F2P20265 443 aaPredicted RBP12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 ELAVL4P26378 380 aaKnown RBP12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 PSG6Q00889 435 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 SRYQ05066 204 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 STX5Q13190 355 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 PDE7AQ13946 482 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 EFR3AQ14156 821 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 IL23RQ5VWK5 629 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 LIX1LQ8IVB5 337 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 WDR75Q8IWA0 830 aaKnown RBP12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 WDSUB1Q8N9V3 476 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 LRRC8CQ8TDW0 803 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 ABTB1Q969K4 478 aaPredicted RBP12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 ERP27Q96DN0 273 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 ELP4Q96EB1 424 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 SLC35A4Q96G79 324 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 TRIB1Q96RU8 372 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 TIMP4Q99727 224 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 UGT2B28Q9BY64 529 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 ASIC5Q9NY37 505 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 FLRT3Q9NZU0 649 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 MARCOQ9UEW3 520 aaPredicted RBP12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 DKKL1Q9UK85 242 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 RPH3AQ9Y2J0 694 aaPredicted RBP12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 WIF1Q9Y5W5 379 aa12.42□□□□□ -0.42
VPS9D1-204ENST00000565023 NUP214P35658 2090 aaPredicted RBP12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 A0A087WV62 115 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 GXYLT2A0PJZ3 443 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 SDHDO14521 159 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 GMFGO60234 142 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 ABCB7O75027 752 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 TOXO94900 526 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 PRPS2P11908 318 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 PTGER4P35408 488 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 GCKP35557 465 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 PNLIPRP2P54317 469 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 MANFP55145 182 aaKnown RBP12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 MAD2L1Q13257 205 aaPredicted RBP12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 GAB1Q13480 694 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 SNTB1Q13884 538 aaKnown RBP12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 PTGR1Q14914 329 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 ZNHIT3Q15649 155 aaPredicted RBP12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 GALNT10Q86SR1 603 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 PLCZ1Q86YW0 608 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 ZNF295-AS1Q8N0V1 137 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 TNIP2Q8NFZ5 429 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 OR4K17Q8NGC6 315 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 ZFP28Q8NHY6 868 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 PIWIL2Q8TC59 973 aaKnown RBP12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 NUDT8Q8WV74 236 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 DYDC1Q8WWB3 177 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 CKAP2Q8WWK9 683 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 PIK3R3Q92569 461 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 MTERF3Q96E29 417 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 OTUB1Q96FW1 271 aaPredicted RBP12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 CHMP6Q96FZ7 201 aa12.41□□□□□ -0.42
VPS9D1-204ENST00000565023 C7orf26Q96N11 449 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms