RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PRAMEF25A6NGN4 478 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 TUBAL3A6NHL2 446 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 OR6C70A6NIJ9 312 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 TMEM233B4DJY2 109 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 NME6O75414 186 aaPredicted RBP16.8■□□□□ 0.28
CLN6-204ENST00000564752 REM1O75628 298 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 EPXP11678 715 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 CYP4B1P13584 511 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 CREB1P16220 341 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 TACR1P25103 407 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 GCKP35557 465 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 MC3RP41968 323 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 CORO7P57737 925 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 PSPHP78330 225 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 PRSS53Q2L4Q9 553 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 SH2D4BQ5SQS7 431 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 TMEM107Q6UX40 140 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 Q6ZSR9 355 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 ADGRE4PQ86SQ3 457 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 TGIF2LYQ8IUE0 185 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 CHDHQ8NE62 594 aaPredicted RBP16.8■□□□□ 0.28
CLN6-204ENST00000564752 AGR3Q8TD06 166 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 TMCO6Q96DC7 493 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 EGLN2Q96KS0 407 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 COL21A1Q96P44 957 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 TUBA1CQ9BQE3 449 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 TUBB1Q9H4B7 451 aa16.8■□□□□ 0.28
CLN6-204ENST00000564752 HRNRQ86YZ3 2850 aaPredicted RBP16.8■□□□□ 0.28
CLN6-204ENST00000564752 A0A087WV62 115 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 LSM1O15116 133 aaKnown RBP16.79■□□□□ 0.28
CLN6-204ENST00000564752 RGS16O15492 202 aaPredicted RBP16.79■□□□□ 0.28
CLN6-204ENST00000564752 ABCB7O75027 752 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 FGF4P08620 206 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 CT45A8P0DMV1 189 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 CT45A9P0DMV2 189 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 SDC1P18827 310 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 DNASE1P24855 282 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 IL12BP29460 328 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 SERPINB5P36952 375 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 GFRA1P56159 465 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 SORDQ00796 357 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 ZNF844Q08AG5 666 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 GALNTL6Q49A17 601 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 CT45A2Q5DJT8 189 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 NPSR1Q6W5P4 371 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 TRIM42Q8IWZ5 723 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 OR14L1PQ8NHC6 308 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 LINC01560Q8TB33 94 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 GFM2Q969S9 779 aaKnown RBP16.79■□□□□ 0.28
CLN6-204ENST00000564752 SLC35A4Q96G79 324 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 POM121Q96HA1 1249 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 FCRL1Q96LA6 429 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 AMDHD1Q96NU7 426 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 UCN2Q96RP3 112 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 GLIPR2Q9H4G4 154 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 DDX18Q9NVP1 670 aaKnown RBP16.79■□□□□ 0.28
CLN6-204ENST00000564752 PLEKHA6Q9Y2H5 1048 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 TMED5Q9Y3A6 229 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 OR10H1Q9Y4A9 318 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 TRAF6Q9Y4K3 522 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 MED12Q93074 2177 aa16.79■□□□□ 0.28
CLN6-204ENST00000564752 EEF1E1-BLOC1S5C9J1V9 151 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 PIP5K1BO14986 540 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 PDPK1O15530 556 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 EEF1E1O43324 174 aaKnown RBP16.78■□□□□ 0.28
CLN6-204ENST00000564752 TYROBPO43914 113 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 RCBTB2O95199 551 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 TMIGD3P0DMS9 266 aaPredicted RBP16.78■□□□□ 0.28
CLN6-204ENST00000564752 FOXF2Q12947 444 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 EFR3AQ14156 821 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 RFTN2Q52LD8 501 aaPredicted RBP16.78■□□□□ 0.28
CLN6-204ENST00000564752 ENPP6Q6UWR7 440 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 PLCZ1Q86YW0 608 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 SLC44A2Q8IWA5 706 aaPredicted RBP16.78■□□□□ 0.28
CLN6-204ENST00000564752 TSSK3Q96PN8 268 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 ADOQ96SZ5 270 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 TAS2R10Q9NYW0 307 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 RAB21Q9UL25 225 aa16.78■□□□□ 0.28
CLN6-204ENST00000564752 NIPBLQ6KC79 2804 aaeCLIP16.78■□□□□ 0.28
CLN6-204ENST00000564752 MPDZO75970 2070 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 PLOD2O00469 737 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 AKAP10O43572 662 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 TSPAN2O60636 221 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 BPGMP07738 259 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 SRD5A2P31213 254 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 DGKQP52824 942 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 SRYQ05066 204 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 HSPB3Q12988 150 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 ANKRD26P1Q6NSI1 321 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 LARP4Q71RC2 724 aaKnown RBP eCLIP16.77■□□□□ 0.28
CLN6-204ENST00000564752 CLHC1Q8NHS4 586 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 PPP1R14CQ8TAE6 165 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 RNF138Q8WVD3 245 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 WNT2BQ93097 391 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 PPCDCQ96CD2 204 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 MBD6Q96DN6 1003 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 ZNF764Q96H86 408 aaPredicted RBP16.77■□□□□ 0.28
CLN6-204ENST00000564752 ZFP3Q96NJ6 502 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 ALPK1Q96QP1 1244 aa16.77■□□□□ 0.28
CLN6-204ENST00000564752 TM9SF2Q99805 663 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms