RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SEC14L3Q9UDX4 400 aa14.66□□□□□ -0.06
RAB40C-208ENST00000564703 SVILO95425 2214 aa14.66□□□□□ -0.06
RAB40C-208ENST00000564703 PRAMEF25A6NGN4 478 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 ASNA1O43681 348 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 ICOSLGO75144 302 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 KCNK2O95069 426 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 ZCCHC18P0CG32 403 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 CYP4B1P13584 511 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 LCN1P31025 176 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 LSP1P33241 339 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 SEC24CP53992 1094 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 TXNL4AP83876 142 aaKnown RBP14.65□□□□□ -0.06
RAB40C-208ENST00000564703 RBPJQ06330 500 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 SLC10A1Q14973 349 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 ZNF324BQ6AW86 544 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-208ENST00000564703 CGB2Q6NT52 195 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 TMEM81Q6P7N7 255 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 FIGNL1Q6PIW4 674 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 GFRALQ6UXV0 394 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 BNC2Q6ZN30 1099 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-208ENST00000564703 FUNDC1Q8IVP5 155 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 ST6GALNAC3Q8NDV1 305 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 XAGE5Q8WWM1 108 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 NEURL3Q96EH8 262 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 DTNBP1Q96EV8 351 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 OTUB1Q96FW1 271 aaPredicted RBP14.65□□□□□ -0.06
RAB40C-208ENST00000564703 ZNF597Q96LX8 424 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 OSBPL11Q9BXB4 747 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 TTTY12Q9BZ98 90 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 FAM107BQ9H098 131 aa14.65□□□□□ -0.06
RAB40C-208ENST00000564703 PINLYPA6NC86 204 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 ANKUB1A6NFN9 424 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 FAM166BA8MTA8 275 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 AK1P00568 194 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 ELAVL4P26378 380 aaKnown RBP14.64□□□□□ -0.07
RAB40C-208ENST00000564703 MST1P26927 711 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 CDKN2CP42773 168 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 ZFP36L2P47974 494 aaKnown RBP14.64□□□□□ -0.07
RAB40C-208ENST00000564703 CASP9P55211 416 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 RPS26P62854 115 aaKnown RBP14.64□□□□□ -0.07
RAB40C-208ENST00000564703 RCAN2Q14206 197 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 SAXO2Q658L1 398 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 BICRALQ6AI39 1079 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 DESI1Q6ICB0 168 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 SLC2A7Q6PXP3 512 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 C16orf62Q7Z3J2 963 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 OR1J4Q8NGS1 313 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 FAM110BQ8TC76 370 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 MIPOL1Q8TD10 442 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 TSPEARQ8WU66 669 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 TMEM41AQ96HV5 264 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 SLX1AQ9BQ83 275 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 TBL1XR1Q9BZK7 514 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 HOXD1Q9GZZ0 328 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 DEFB127Q9H1M4 99 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 TSPAN10Q9H1Z9 355 aaPredicted RBP14.64□□□□□ -0.07
RAB40C-208ENST00000564703 OR51I1Q9H343 314 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 PROK2Q9HC23 129 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 HHATLQ9HCP6 504 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 NDUFAF1Q9Y375 327 aa14.64□□□□□ -0.07
RAB40C-208ENST00000564703 ZNF462Q96JM2 2506 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 A0A0G2JMM0 328 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 A0A1W2PP18 115 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 A0A1W2PPB8 328 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 A0A1W2PRS3 328 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 C2orf72A6NCS6 295 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 KIR3DP1A8MWS1 328 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 GNB5O14775 395 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 ANGPT2O15123 496 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 CDC40O60508 579 aaKnown RBP eCLIP14.63□□□□□ -0.07
RAB40C-208ENST00000564703 CCDC22O60826 627 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 TRIM3O75382 744 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-208ENST00000564703 UNC5CO95185 931 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 UTS2O95399 124 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 CBX6O95503 412 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 SNRPB2P08579 225 aaKnown RBP14.63□□□□□ -0.07
RAB40C-208ENST00000564703 ADSLP30566 484 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-208ENST00000564703 MAN2A2P49641 1150 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 KHKP50053 298 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 FOXO1Q12778 655 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 TOMM20Q15388 145 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.63□□□□□ -0.07
RAB40C-208ENST00000564703 HYAL4Q2M3T9 481 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 RNFT1Q5M7Z0 435 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 CCNJQ5T5M9 372 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 TNFAIP8L2Q6P589 184 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-208ENST00000564703 DNAJC14Q6Y2X3 702 aaPredicted RBP14.63□□□□□ -0.07
RAB40C-208ENST00000564703 SPATA21Q7Z572 469 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 GHDCQ8N2G8 530 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 FAM109AQ8N4B1 249 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 OR5D16Q8NGK9 328 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 GTF2H4Q92759 462 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 GPR137Q96N19 417 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 PHF12Q96QT6 1004 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 RAD21L1Q9H4I0 556 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 LDAHQ9H6V9 325 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 EXO5Q9H790 373 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 SERHLQ9NQF3 203 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 UBQLN4Q9NRR5 601 aa14.63□□□□□ -0.07
RAB40C-208ENST00000564703 LEF1Q9UJU2 399 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms