RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 EBPLQ9BY08 206 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 PTGES2Q9H7Z7 377 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 ANKRA2Q9H9E1 313 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 Q9N2J8 555 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 CLCF1Q9UBD9 225 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 TBK1Q9UHD2 729 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 MID2Q9UJV3 735 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 DKKL1Q9UK85 242 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 FBXL2Q9UKC9 423 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 EMCNQ9ULC0 261 aa11.05□□□□□ -0.64
GTF3C1-204ENST00000564664 MED12Q93074 2177 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 A0A1W2PPM1 405 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 A8MXE2 369 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 EEF1E1-BLOC1S5C9J1V9 151 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 UPK1AO00322 258 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 EEF1E1O43324 174 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 RGS14O43566 566 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 HCRTR2O43614 444 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 PLIN3O60664 434 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 PSMG1O95456 288 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 IL33O95760 270 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 JUNP05412 331 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 CPA3P15088 417 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 DDX5P17844 614 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 TACR1P25103 407 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 EVI2BP34910 448 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 FOXA1P55317 472 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 WNT3P56703 355 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 CLDN18P56856 261 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 SNTB1Q13884 538 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 FGFBP1Q14512 234 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 KIAA0040Q15053 153 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 VPS26BQ4G0F5 336 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 LIPMQ5VYY2 423 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 GRAMD2AQ8IUY3 354 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 MEIOBQ8N635 442 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 OR4N2Q8NGD1 307 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 CEP70Q8NHQ1 597 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 INTS12Q96CB8 462 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 AMDHD1Q96NU7 426 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 ALPK1Q96QP1 1244 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 KCNA7Q96RP8 456 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 RHOXF2Q9BQY4 288 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 LMF2Q9BU23 707 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 TRMOQ9BU70 441 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 TMUB1Q9BVT8 246 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 RBM24Q9BX46 236 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 GLIPR2Q9H4G4 154 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 CCM2LQ9NUG4 571 aaPredicted RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 DDX18Q9NVP1 670 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 FAM120CQ9NX05 1096 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 PPP4R1LQ9P1A2 415 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 STOML1Q9UBI4 398 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 NDRG3Q9UGV2 375 aa11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 PRRC2AP48634 2157 aaKnown RBP11.04□□□□□ -0.64
GTF3C1-204ENST00000564664 MAP1AP78559 2803 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 COPEO14579 308 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 MSTNO14793 375 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 CASKO14936 926 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 TBX19O60806 448 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 SEC22BO75396 215 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 TNFRSF21O75509 655 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 CD99P14209 185 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 LCN1P31025 176 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 CPA2P48052 419 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 STARP49675 285 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 AGFG1P52594 562 aaKnown RBP11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 B3GALT5-AS1P59052 145 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 C17orf67Q0P5P2 114 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 ZNF155Q12901 538 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 FOXF2Q12947 444 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 FBXW10Q5XX13 1052 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 OR5M10Q6IEU7 315 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 TMEM107Q6UX40 140 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 TGIF2LYQ8IUE0 185 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 CCDC63Q8NA47 563 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 SMPDL3BQ92485 455 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 NRGNQ92686 78 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 EFHD2Q96C19 240 aaPredicted RBP11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 PIGQQ9BRB3 760 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 YIPF4Q9BSR8 244 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 G6PC3Q9BUM1 346 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 DSN1Q9H410 356 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 C1orf109Q9NX04 203 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 PACSIN3Q9UKS6 424 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 TMED5Q9Y3A6 229 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 CCL27Q9Y4X3 112 aa11.03□□□□□ -0.64
GTF3C1-204ENST00000564664 IGLV3-32A0A0A0MS00 114 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 AZIN1O14977 448 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 TNFSF13O75888 250 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 SOX30O94993 753 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 KCNH1O95259 989 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 CHEK2O96017 543 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 RAF1P04049 648 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 PRPS2P11908 318 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 NEFHP12036 1026 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 FOSL1P15407 271 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 HK1P19367 917 aa11.02□□□□□ -0.65
GTF3C1-204ENST00000564664 MC3RP41968 323 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms