RNA–Protein interactions for RNA: ENST00000564641.1

CHD9-212, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-212ENST00000564641 PRMT1Q99873 361 aaKnown RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 UBAC1Q9BSL1 405 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 MTG1Q9BT17 334 aaPredicted RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 ACAT2Q9BWD1 397 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 LRRC2Q9BYS8 371 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 THAP9Q9H5L6 903 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 NHEJ1Q9H9Q4 299 aaPredicted RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 PARVBQ9HBI1 364 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 QPCTLQ9NXS2 382 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SLCO1C1Q9NYB5 712 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 TBX21Q9UL17 535 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 CCPG1Q9ULG6 757 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 SATB2Q9UPW6 733 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 PRELID1Q9Y255 219 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 CHKBQ9Y259 395 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 N6AMT1Q9Y5N5 214 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 R4GN57 208 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 PLIN4Q96Q06 1357 aa3.32□□□□□ -1.88
CHD9-212ENST00000564641 COL11A1P12107 1806 aaPredicted RBP3.32□□□□□ -1.88
CHD9-212ENST00000564641 BDP1A6H8Y1 2624 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 PARP14Q460N5 1801 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 NEDD4P46934 1319 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 CCDC160A6NGH7 325 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 SMIM23A6NLE4 172 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 CCDC169A6NNP5 214 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 TCP11X1B4DZS4 312 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 E9PBE3 544 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 K7EQD1 137 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 TRAFD1O14545 582 aaPredicted RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 RTL8CO15255 209 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 MAPK13O15264 365 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 POLR2DO15514 142 aaKnown RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 GPAA1O43292 621 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 RANBP6O60518 1105 aaKnown RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 GALR3O60755 368 aaPredicted RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 KERAO60938 352 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 FCGR3BO75015 233 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 STAM2O75886 525 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 SLC16A8O95907 504 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 AGTP01019 485 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 APOEP02649 317 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 RLN1P04808 185 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 MELTFP08582 738 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 SPP1P10451 314 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 CCNB1P14635 433 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 ETS2P15036 469 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 TCF4P15884 667 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 MPZP25189 248 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 ELAVL4P26378 380 aaKnown RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 CLDN15P56746 228 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 KIAA1024LP59773 190 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 PTENP60484 403 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 RELAQ04206 551 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 CD300CQ08708 224 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 TNK1Q13470 666 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 TRIM29Q14134 588 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 KRT31Q15323 416 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 RPS6KA1Q15418 735 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 STXBP2Q15833 593 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 EXT1Q16394 746 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 NDUFA5Q16718 116 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 FAM166AQ6J272 317 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 NEPROQ6NW34 567 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 VITQ6UXI7 678 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 LRRC74BQ6ZQY2 392 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 APTXQ7Z2E3 356 aaKnown RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 CEACAM19Q7Z692 300 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 ZBED8Q8IZ13 594 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 BBS5Q8N3I7 341 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 TRPV1Q8NER1 839 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 OR4K1Q8NGD4 311 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 OR4D10Q8NGI6 311 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 OR10G7Q8NGN6 311 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 NSMAFQ92636 917 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 ESR2Q92731 530 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 BCL2L2Q92843 193 aaPredicted RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 STMN2Q93045 179 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 CNRIP1Q96F85 164 aaPredicted RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 DYNLL2Q96FJ2 89 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 EEF2KMTQ96G04 330 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 MS4A14Q96JA4 679 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 CGREF1Q99674 301 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 DDX50Q9BQ39 737 aaKnown RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 SLC39A3Q9BRY0 314 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 PLGRKTQ9HBL7 147 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 CDH20Q9HBT6 801 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 RAVER2Q9HCJ3 691 aaKnown RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 IARS2Q9NSE4 1012 aaKnown RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 PNPLA3Q9NST1 481 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 NMRK1Q9NWW6 199 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 SEPT10Q9P0V9 454 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 ZNF107Q9UII5 783 aaPredicted RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 MOSPD1Q9UJG1 213 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 FBXL5Q9UKA1 691 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 APPL1Q9UKG1 709 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 ANGPTL2Q9UKU9 493 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 ELF5Q9UKW6 265 aaPredicted RBP3.31□□□□□ -1.88
CHD9-212ENST00000564641 CELA1Q9UNI1 258 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 TFR2Q9UP52 801 aa3.31□□□□□ -1.88
CHD9-212ENST00000564641 TMED3Q9Y3Q3 217 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms