RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SYPL1Q16563 259 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 PCK2Q16822 640 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 BLOC1S2Q6QNY1 142 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 GCNT7Q6ZNI0 430 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 LANCL3Q6ZV70 420 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 ZNF683Q8IZ20 524 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 BEST4Q8NFU0 473 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 TRMT10AQ8TBZ6 339 aaKnown RBP2.11□□□□□ -2.07
CHD9-209ENST00000564255 LRRC15Q8TF66 581 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 COQ2Q96H96 371 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 ART5Q96L15 291 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 OCR1Q9BZK8 76 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 TRIM9Q9C026 710 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 IL1RL2Q9HB29 575 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 TM9SF3Q9HD45 589 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 ZDHHC18Q9NUE0 388 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 THEGQ9P2T0 379 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 EIF3KQ9UBQ5 218 aaKnown RBP2.11□□□□□ -2.07
CHD9-209ENST00000564255 MLXQ9UH92 298 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 PROCRQ9UNN8 238 aa2.11□□□□□ -2.07
CHD9-209ENST00000564255 IGLV7-46A0A075B6I9 117 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 IGLV4-3A0A075B6K6 122 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 PRR23AA6NEV1 266 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 ZSCAN5BA6NJL1 495 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 SOCS3O14543 225 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 PRRG1O14668 218 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 ARPC3O15145 178 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 EFNA2O43921 213 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 DUS4LO95620 317 aaKnown RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 JCHAINP01591 159 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 BCKDHAP12694 445 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 TBXA2RP21731 343 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 TAGLN2P37802 199 aaKnown RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 STK19P49842 368 aaPredicted RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 SLC7A2P52569 658 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 PLA2G16P53816 162 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 OSTNP61366 133 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 EIF2B1Q14232 305 aaKnown RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 SIX1Q15475 284 aaPredicted RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 UBE2V2Q15819 145 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 C17orf58Q2M2W7 97 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 BOLA3Q53S33 107 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 CELF3Q5SZQ8 465 aaKnown RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 CCDC183Q5T5S1 534 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 FAM71F2Q6NXP2 309 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 APOOLQ6UXV4 268 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 LRRTM1Q86UE6 522 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 SYT14Q8NB59 555 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 Q8NBF4 154 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 HCAR2Q8TDS4 363 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 NT5C3BQ969T7 300 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 C18orf25Q96B23 403 aaPredicted RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 ELMO2Q96JJ3 720 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 AMDHD1Q96NU7 426 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 CCDC28BQ9BUN5 200 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 SMOXQ9NWM0 555 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 FBXO7Q9Y3I1 522 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 SPACA6W5XKT8 324 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 BICRAQ9NZM4 1560 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 A0A087WYN8 130 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 TRBV7-9A0A0J9YWB2 115 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 A0A0U1RQS6 177 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 K7ERI5 159 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 AP3B1O00203 1094 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 SEMA4FO95754 770 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 IL1BP01584 269 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 TPM2P07951 284 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 ANXA3P12429 323 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 ZNF44P15621 663 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 UGT1A4P22310 534 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 RPL4P36578 427 aaKnown RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 POU3F4P49335 361 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 GSK3BP49841 420 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 SULT1E1P49888 294 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 RIDAP52758 137 aaKnown RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 CRIP2P52943 208 aaPredicted RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 EWSR1Q01844 656 aaKnown RBP eCLIP2.1□□□□□ -2.07
CHD9-209ENST00000564255 DDX39BQ13838 428 aaKnown RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 ATXN7L3Q14CW9 347 aaPredicted RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 CHI3L2Q15782 390 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 FILIP1LQ4L180 1135 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 DCST2Q5T1A1 773 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 FAM219BQ5XKK7 198 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 ZYG11AQ6WRX3 759 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 DPY19L4Q7Z388 723 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 HSD11B1LQ7Z5J1 315 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 TSEN54Q7Z6J9 526 aaKnown RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 LRRC43Q8N309 656 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 CLDN19Q8N6F1 224 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 OR52J3Q8NH60 311 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 CTNNBL1Q8WYA6 563 aaPredicted RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 RPL3LQ92901 407 aaKnown RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 OPRPNQ99935 248 aaPredicted RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 TMEM121Q9BTD3 319 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 FGFBP2Q9BYJ0 223 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 BARHL1Q9BZE3 327 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 ADGRL4Q9HBW9 690 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 MRPL39Q9NYK5 338 aaKnown RBP2.1□□□□□ -2.07
CHD9-209ENST00000564255 PIPOXQ9P0Z9 390 aa2.1□□□□□ -2.07
CHD9-209ENST00000564255 CTSZQ9UBR2 303 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms