RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 D2HGDHQ8N465 521 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 NETO1Q8TDF5 533 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 NAT6Q93015 286 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 TCEAL3Q969E4 200 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 FUNDC2Q9BWH2 189 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 SPATA9Q9BWV2 254 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 PRDM9Q9NQV7 894 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 RAPGEFL1Q9UHV5 662 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 ATXN7L1Q9ULK2 861 aaPredicted RBP16.57■□□□□ 0.24
GDE1-203ENST00000564172 PCDHGA5Q9Y5G8 931 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 ZNF780BQ9Y6R6 833 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 SPACA6W5XKT8 324 aa16.57■□□□□ 0.24
GDE1-203ENST00000564172 GPR179Q6PRD1 2367 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 A0A0A6YYC8 382 aaPredicted RBP16.56■□□□□ 0.24
GDE1-203ENST00000564172 A0A1W2PQM1 296 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 I3L1I5 382 aaPredicted RBP16.56■□□□□ 0.24
GDE1-203ENST00000564172 CYR61O00622 381 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 RDH16O75452 317 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 CREG1O75629 220 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 GPIP06744 558 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 UMPSP11172 480 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 ETFAP13804 333 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 PSMA4P25789 261 aaKnown RBP16.56■□□□□ 0.24
GDE1-203ENST00000564172 MPIP34949 423 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 MAPK10P53779 464 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 FADDQ13158 208 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 CTF1Q16619 201 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 GARNL3Q5VVW2 1013 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 FCRLBQ6BAA4 426 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 ZC3H14Q6PJT7 736 aaKnown RBP16.56■□□□□ 0.24
GDE1-203ENST00000564172 ARSKQ6UWY0 536 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 ZNF574Q6ZN55 896 aaPredicted RBP16.56■□□□□ 0.24
GDE1-203ENST00000564172 TMPRSS9Q7Z410 1059 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 OR52E4Q8NGH9 312 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 FAM110BQ8TC76 370 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 SNAPC3Q92966 411 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 MARC2Q969Z3 335 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 NEURL3Q96EH8 262 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 CCDC120Q96HB5 630 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 AURKCQ9UQB9 309 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 MAP4K5Q9Y4K4 846 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 AUP1Q9Y679 476 aa16.56■□□□□ 0.24
GDE1-203ENST00000564172 FITM1A5D6W6 292 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 MEN1O00255 615 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 KHNYNO15037 678 aaKnown RBP16.55■□□□□ 0.24
GDE1-203ENST00000564172 GALR2O43603 387 aaPredicted RBP16.55■□□□□ 0.24
GDE1-203ENST00000564172 B4GALT2O60909 372 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 ZNF780AO75290 641 aaPredicted RBP16.55■□□□□ 0.24
GDE1-203ENST00000564172 CCT3P49368 545 aaKnown RBP16.55■□□□□ 0.24
GDE1-203ENST00000564172 CCL7P80098 99 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 SAXO2Q658L1 398 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 USP51Q70EK9 711 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 KMT5CQ86Y97 462 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 PLCZ1Q86YW0 608 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 PM20D2Q8IYS1 436 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 NCLNQ969V3 563 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 WACQ9BTA9 647 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 PLSCR3Q9NRY6 295 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 H3BMH7 237 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 TNFRSF21O75509 655 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 PRKD3O94806 890 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 IFNA14P01570 189 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 EEF1B2P24534 225 aaKnown RBP16.55■□□□□ 0.24
GDE1-203ENST00000564172 PTGER1P34995 402 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 GPC1P35052 558 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 CAPGP40121 348 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 OR2B6P58173 313 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 SHC2P98077 582 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 PROX2Q3B8N5 592 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 SPDYE7PQ495Y7 208 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 Q5BKY6 102 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 PRSS48Q7RTY5 328 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 TTC29Q8NA56 475 aaPredicted RBP16.55■□□□□ 0.24
GDE1-203ENST00000564172 OR4K14Q8NGD5 310 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 MAL2Q969L2 176 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 FAM162AQ96A26 154 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 C11orf16Q9NQ32 467 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 PAK1IP1Q9NWT1 392 aaPredicted RBP16.55■□□□□ 0.24
GDE1-203ENST00000564172 ANAPC2Q9UJX6 822 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 BAG5Q9UL15 447 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 CLCA2Q9UQC9 943 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 BOLA1Q9Y3E2 137 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 CACNG2Q9Y698 323 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 SPEGQ15772 3267 aa16.55■□□□□ 0.24
GDE1-203ENST00000564172 FAM227AF5H4B4 570 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 TOX3O15405 576 aaPredicted RBP16.54■□□□□ 0.24
GDE1-203ENST00000564172 CHST10O43529 356 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 NSA2O95478 260 aaKnown RBP16.54■□□□□ 0.24
GDE1-203ENST00000564172 RPLP0P05388 317 aaKnown RBP16.54■□□□□ 0.24
GDE1-203ENST00000564172 CKMT1AP12532 417 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 FOLR1P15328 257 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 XKP51811 444 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 SKP1P63208 163 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 VEZF1Q14119 521 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 GRM7Q14831 915 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 GPR19Q15760 415 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 TBCELQ5QJ74 424 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 STEAP3Q658P3 488 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 ERMP1Q7Z2K6 904 aa16.54■□□□□ 0.24
GDE1-203ENST00000564172 C6orf120Q7Z4R8 191 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms