RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 SWI5Q1ZZU3 235 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 C16orf59Q7L2K0 433 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 RNF180Q86T96 592 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 DNTTIP1Q9H147 329 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 MTG2Q9H4K7 406 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 ZFYVE1Q9HBF4 777 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 SLC6A20Q9NP91 592 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 SCML2Q9UQR0 700 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 NOSIPQ9Y314 301 aaKnown RBP11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 TRIP12Q14669 1992 aaPredicted RBP11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 M0R3H8 397 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 CHST10O43529 356 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 RGS9O75916 674 aaPredicted RBP11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 TYMPP19971 482 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 THBS2P35442 1172 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 SLC6A12P48065 614 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 CSNK1DP48730 415 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 MINDY4Q4G0A6 757 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 LSRQ86X29 649 aaPredicted RBP11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 KRT78Q8N1N4 520 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 SLC38A5Q8WUX1 472 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 FBXO32Q969P5 355 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 PPCDCQ96CD2 204 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 FCRL4Q96PJ5 515 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 TREX2Q9BQ50 279 aaPredicted RBP11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 TAS2R3Q9NYW6 316 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 GREB1Q4ZG55 1949 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 NPIPB8E9PQR5 432 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 SGCEO43556 437 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 IGF2P01344 180 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 GABRA1P14867 456 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 ZNF8P17098 575 aaPredicted RBP11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 MTNR1BP49286 362 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 E2F1Q01094 437 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 ZFP82Q8N141 532 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 TTC9BQ8N6N2 239 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 OR11G2Q8NGC1 345 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 TEX47Q8TBZ9 253 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 TM6SF2Q9BZW4 377 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 REEP4Q9H6H4 257 aa11.61□□□□□ -0.55
SCAMP2-204ENST00000563829 A0A1W2PPK0 400 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 IRGMA1A4Y4 181 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 PGRMC2O15173 223 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 RNF13O43567 381 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 KDELR3O43731 214 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 SSX5O60225 188 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 FGF18O76093 207 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 RHOCP08134 193 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 PFN3P60673 137 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 SEC61A1P61619 476 aaKnown RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 RPS13P62277 151 aaKnown RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 TSTA3Q13630 321 aaPredicted RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 TMEM255AQ5JRV8 349 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 FAM74A1Q5RGS3 127 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 HECTD3Q5T447 861 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 GSG1LQ6UXU4 331 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 SYT9Q86SS6 491 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 MCATQ8IVS2 390 aaKnown RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 HORMAD2Q8N7B1 307 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 OR4D9Q8NGE8 314 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 OR51Q1Q8NH59 317 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 ORAI3Q9BRQ5 295 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 FNDC11Q9BVV2 318 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 FAIM2Q9BWQ8 316 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 SLC12A9Q9BXP2 914 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 SEMA4CQ9C0C4 833 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 SMG9Q9H0W8 520 aaKnown RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 IL20RAQ9UHF4 553 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 MBD1Q9UIS9 605 aaPredicted RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 RCE1Q9Y256 329 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 SIRT4Q9Y6E7 314 aaPredicted RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 COL4A4P53420 1690 aaPredicted RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 PAPPA2Q9BXP8 1791 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 MPTX1A8MV57 137 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 LRRN3E7EW58 273 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 RLN2P04090 185 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 FABP1P07148 127 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 SNRPBP14678 240 aaKnown RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 XPAP23025 273 aaPredicted RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 TIA1P31483 386 aaKnown RBP eCLIP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 MAPK9P45984 424 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 CDK5Q00535 292 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 SLC22A10Q63ZE4 541 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 SLC27A4Q6P1M0 643 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 HAGHLQ6PII5 290 aaPredicted RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 ARL9Q6T311 187 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 LRRN1Q6UXK5 716 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 MACC1Q6ZN28 852 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 HDDC3Q8N4P3 179 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 APOBEC4Q8WW27 367 aaKnown RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 TMEM19Q96HH6 336 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 CMSS1Q9BQ75 279 aaKnown RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 BHLHE41Q9C0J9 482 aaPredicted RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 TINAGL1Q9GZM7 467 aaPredicted RBP11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 LRRN3Q9H3W5 708 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 BIN3Q9NQY0 253 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 NDRG3Q9UGV2 375 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 CA5BQ9Y2D0 317 aa11.6□□□□□ -0.55
SCAMP2-204ENST00000563829 A0A0G2JPF8 293 aa11.59□□□□□ -0.55
SCAMP2-204ENST00000563829 A0A1W2PRB8 838 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms