RNA–Protein interactions for RNA: ENST00000561817.5

CAPN3-210, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-210ENST00000561817 RBM4BQ9BQ04 359 aaKnown RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 PSD2Q9BQI7 771 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 NUDT22Q9BRQ3 303 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 DUSP23Q9BVJ7 150 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 RBM4Q9BWF3 364 aaKnown RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 GTPBP2Q9BX10 602 aaKnown RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 ACTRT3Q9BYD9 372 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 TOR3AQ9H497 397 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 ZNF768Q9H5H4 540 aaKnown RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 CXorf21Q9HAI6 301 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 C3orf14Q9HBI5 128 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 BATF3Q9NR55 127 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 LANCL2Q9NS86 450 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 ACER3Q9NUN7 267 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 HCN3Q9P1Z3 774 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 IFT80Q9P2H3 777 aaPredicted RBP6.09□□□□□ -1.43
CAPN3-210ENST00000561817 P2RX2Q9UBL9 471 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 RABL2BQ9UNT1 228 aa6.09□□□□□ -1.43
CAPN3-210ENST00000561817 SEC16AO15027 2179 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 WDFY4Q6ZS81 3184 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 BLACEA4D250 179 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 EME2A4GXA9 379 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 DPPA5A6NC42 116 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 A8MVJ9 347 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 H3BNH8 94 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 J3KTA2 159 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 M0R3H8 397 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 SLC16A6O15403 523 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 TOX3O15405 576 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 YKT6O15498 198 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF749O43361 778 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 DYRK3O43781 588 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 PCDHGA12O60330 932 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 MITFO75030 526 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 PDE9AO76083 593 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 H6PDO95479 791 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 CLIC3O95833 236 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 LGI1O95970 557 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 PF4P02776 101 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 CLPSP04118 112 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ANKRD34CP0C6C1 535 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 NR2F1P10589 423 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ITGAMP11215 1152 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 RHCEP18577 417 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 RPS4Y1P22090 263 aaKnown RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 GSTT1P30711 240 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 RRM2P31350 389 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 KRT20P35900 424 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 POLR2IP36954 125 aaKnown RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ANXA11P50995 505 aaKnown RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 PRKAG1P54619 331 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 RAC1P63000 192 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 BTG2P78543 158 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 CHRNEQ04844 493 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 KCNAB2Q13303 367 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 GRM7Q14831 915 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 SF3A2Q15428 464 aaKnown RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 NR0B2Q15466 257 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 NPTX1Q15818 432 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 DUSP5Q16690 384 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 NDUFA9Q16795 377 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 SYT16Q17RD7 645 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 FAM214AQ32MH5 1076 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ARHGAP11BQ3KRB8 267 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ZIK1Q3SY52 487 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 AMZ1Q400G9 498 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 TRIM61Q5EBN2 209 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 SNAP47Q5SQN1 464 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF770Q6IQ21 691 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 TCTN3Q6NUS6 607 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 TMEM71Q6P5X7 295 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ZCCHC12Q6PEW1 402 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 SLC23A3Q6PIS1 610 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 DHRS4L2Q6PKH6 230 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 C6orf15Q6UXA7 325 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 FRRS1Q6ZNA5 592 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 WDR53Q7Z5U6 358 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 RBM45Q8IUH3 476 aaKnown RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF595Q8IYB9 648 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 TTC29Q8NA56 475 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 OR2I1PQ8NGU4 316 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 SPPL2AQ8TCT8 520 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ADAMTS18Q8TE60 1221 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 DOK4Q8TEW6 326 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 PHF10Q8WUB8 498 aaKnown RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 LZICQ8WZA0 190 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 KISS1RQ969F8 398 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF501Q96CX3 271 aaPredicted RBP6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ZG16BQ96DA0 208 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 VMP1Q96GC9 406 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF354BQ96LW1 612 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 COL21A1Q96P44 957 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ZNF347Q96SE7 839 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 PIP5K1AQ99755 562 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 ARHGDIGQ99819 225 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 CRB3Q9BUF7 120 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 BTBD2Q9BX70 525 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 PIGUQ9H490 435 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 CUTCQ9NTM9 273 aa6.08□□□□□ -1.44
CAPN3-210ENST00000561817 EXD2Q9NVH0 621 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms