RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 TMEM233B4DJY2 109 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 H0Y3Z8 333 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 LSM1O15116 133 aaKnown RBP9.33□□□□□ -0.92
CLK3-205ENST00000561673 AKAP10O43572 662 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 FADS1O60427 444 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 SPAG7O75391 227 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 CTAG2O75638 210 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 ZWINTO95229 277 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 FGF4P08620 206 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 NUDT17P0C025 328 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 SDC1P18827 310 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 TCEA1P23193 301 aaKnown RBP9.33□□□□□ -0.92
CLK3-205ENST00000561673 CTSSP25774 331 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 DPP4P27487 766 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 GABRA3P34903 492 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 OPRM1P35372 400 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 GUCA2AQ02747 115 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 HSPB3Q12988 150 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 RCAN2Q14206 197 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 ZNHIT3Q15649 155 aaPredicted RBP9.33□□□□□ -0.92
CLK3-205ENST00000561673 DECR1Q16698 335 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 UGT3A2Q3SY77 523 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 FBXL19-AS1Q494R0 122 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 ARL13AQ5H913 290 aaPredicted RBP9.33□□□□□ -0.92
CLK3-205ENST00000561673 KANK2Q63ZY3 851 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 AAGABQ6PD74 315 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 ADGRE4PQ86SQ3 457 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 TMEM200AQ86VY9 491 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 RIBC1Q8N443 379 aaPredicted RBP9.33□□□□□ -0.92
CLK3-205ENST00000561673 FADS6Q8N9I5 356 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 RNASE6Q93091 150 aaKnown RBP9.33□□□□□ -0.92
CLK3-205ENST00000561673 FCRL1Q96LA6 429 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 TSSK3Q96PN8 268 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 FAM111AQ96PZ2 611 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 UCN2Q96RP3 112 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 LMF2Q9BU23 707 aaKnown RBP9.33□□□□□ -0.92
CLK3-205ENST00000561673 RTN4RQ9BZR6 473 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 IQCGQ9H095 443 aaKnown RBP9.33□□□□□ -0.92
CLK3-205ENST00000561673 DSN1Q9H410 356 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 REEP4Q9H6H4 257 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 Q9N2J8 555 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 CRIM1Q9NZV1 1036 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 MED11Q9P086 117 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 LGALS13Q9UHV8 139 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 DKKL1Q9UK85 242 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 RPH3AQ9Y2J0 694 aaPredicted RBP9.33□□□□□ -0.92
CLK3-205ENST00000561673 TRAF6Q9Y4K3 522 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 CCDC168Q8NDH2 2452 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 EXPH5Q8NEV8 1989 aa9.33□□□□□ -0.92
CLK3-205ENST00000561673 INTS1Q8N201 2190 aaKnown RBP9.33□□□□□ -0.92
CLK3-205ENST00000561673 FREM3P0C091 2139 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 HRNRQ86YZ3 2850 aaPredicted RBP9.32□□□□□ -0.92
CLK3-205ENST00000561673 GXYLT2A0PJZ3 443 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 POM121CA8CG34 1229 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 CLCA1A8K7I4 914 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 PDPK1O15530 556 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 SCO2O43819 266 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 NPHS1O60500 1241 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 RCBTB2O95199 551 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 IL33O95760 270 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 IL18BPO95998 194 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 CHEK2O96017 543 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 IFI6P09912 130 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 TMIGD3P0DMS9 266 aaPredicted RBP9.32□□□□□ -0.92
CLK3-205ENST00000561673 NEFHP12036 1026 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 CHMP24386 653 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 PEX19P40855 299 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 DGKQP52824 942 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 MANFP55145 182 aaKnown RBP9.32□□□□□ -0.92
CLK3-205ENST00000561673 DSCR4P56555 118 aaPredicted RBP9.32□□□□□ -0.92
CLK3-205ENST00000561673 CLDN18P56856 261 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 B3GALT5-AS1P59052 145 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 RPL38P63173 70 aaKnown RBP9.32□□□□□ -0.92
CLK3-205ENST00000561673 IFFO1Q0D2I5 559 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 FOXF2Q12947 444 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 GALNTL6Q49A17 601 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 ZNF385BQ569K4 471 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 MARCH3Q86UD3 253 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 DDIASQ8IXT1 998 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 OR2M3Q8NG83 312 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 OR4K17Q8NGC6 315 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 CLHC1Q8NHS4 586 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 TCP10LQ8TDR4 215 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 AENQ8WTP8 325 aaKnown RBP9.32□□□□□ -0.92
CLK3-205ENST00000561673 DUSP19Q8WTR2 217 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 TWIST2Q8WVJ9 160 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 NRGNQ92686 78 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 WNT2BQ93097 391 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 DTNBP1Q96EV8 351 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 LRRC46Q96FV0 321 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 ZNF764Q96H86 408 aaPredicted RBP9.32□□□□□ -0.92
CLK3-205ENST00000561673 SFXN2Q96NB2 322 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 CCT7Q99832 543 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 ROPN1BQ9BZX4 212 aaPredicted RBP9.32□□□□□ -0.92
CLK3-205ENST00000561673 ROPN1Q9HAT0 212 aaPredicted RBP9.32□□□□□ -0.92
CLK3-205ENST00000561673 EML4Q9HC35 981 aaKnown RBP9.32□□□□□ -0.92
CLK3-205ENST00000561673 EQTNQ9NQ60 294 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 JKAMPQ9P055 326 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 SH3BP4Q9P0V3 963 aa9.32□□□□□ -0.92
CLK3-205ENST00000561673 PPP4R1LQ9P1A2 415 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms