RNA–Protein interactions for RNA: ENST00000561381.5

USP3-220, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2

Gene USP3, Length 979 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-220ENST00000561381 LCP2Q13094 533 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 STX5Q13190 355 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 HEPACAMQ14CZ8 416 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 SH2D4BQ5SQS7 431 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 LGSNQ5TDP6 509 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 GALNT18Q6P9A2 607 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 UBQLNLQ8IYU4 475 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 SAMD14Q8IZD0 417 aaPredicted RBP10.52□□□□□ -0.73
USP3-220ENST00000561381 OR4K17Q8NGC6 315 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 OR5M1Q8NGP8 315 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 CDC26Q8NHZ8 85 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 L3HYPDHQ96EM0 354 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 DACH2Q96NX9 599 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 DSN1Q9H410 356 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 GSTO2Q9H4Y5 243 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 GIMAP4Q9NUV9 329 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 MED11Q9P086 117 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 SENP1Q9P0U3 644 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 PACSIN3Q9UKS6 424 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 MRPS18CQ9Y3D5 142 aaKnown RBP10.52□□□□□ -0.73
USP3-220ENST00000561381 OR10H1Q9Y4A9 318 aa10.52□□□□□ -0.73
USP3-220ENST00000561381 MAP1AP78559 2803 aaPredicted RBP10.52□□□□□ -0.73
USP3-220ENST00000561381 MYO1GB0I1T2 1018 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 RIPK2O43353 540 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 FAM153BP0C7A2 387 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 CD53P19397 219 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 DDCP20711 480 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 CHMP24386 653 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 MPIP34949 423 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 CPOXP36551 454 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 NCBP2P52298 156 aaKnown RBP eCLIP10.51□□□□□ -0.73
USP3-220ENST00000561381 PKNOX1P55347 436 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 FAM27E3Q08E93 113 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 ZNF763Q0D2J5 394 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 C2orf80Q0P641 193 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 GAB1Q13480 694 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 FAM153CQ494X1 144 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 GLE1Q53GS7 698 aaKnown RBP10.51□□□□□ -0.73
USP3-220ENST00000561381 SPDYAQ5MJ70 313 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 VWA1Q6PCB0 445 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 TMEM107Q6UX40 140 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 TREML4Q6UXN2 200 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 P4HA3Q7Z4N8 544 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 KRTAP1-3Q8IUG1 177 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 SLC22A9Q8IVM8 553 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 CCNYL1Q8N7R7 359 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 FADS6Q8N9I5 356 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 MNS1Q8NEH6 495 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 OR2M3Q8NG83 312 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 FIG4Q92562 907 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 STARD4Q96DR4 205 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 BBS4Q96RK4 519 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 SMR3AQ99954 134 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 ACBD3Q9H3P7 528 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 PIGMQ9H3S5 423 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 GLIPR2Q9H4G4 154 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 TNFRSF12AQ9NP84 129 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 MID1IP1Q9NPA3 183 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 TAS2R9Q9NYW1 312 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 C6orf203Q9P0P8 240 aaPredicted RBP10.51□□□□□ -0.73
USP3-220ENST00000561381 PPP4R1LQ9P1A2 415 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 EMCNQ9ULC0 261 aa10.51□□□□□ -0.73
USP3-220ENST00000561381 POLR3HQ9Y535 204 aaPredicted RBP10.51□□□□□ -0.73
USP3-220ENST00000561381 A0A1W2PPM1 405 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 G3V2L1 256 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 UPK1AO00322 258 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 SIAH2O43255 324 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 FADS1O60427 444 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 COQ9O75208 318 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 SMNDC1O75940 238 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP3-220ENST00000561381 HK1P19367 917 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 HOXC12P31275 282 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 SUCLG1P53597 346 aaKnown RBP10.5□□□□□ -0.73
USP3-220ENST00000561381 DIO3P55073 304 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 DSCR4P56555 118 aaPredicted RBP10.5□□□□□ -0.73
USP3-220ENST00000561381 BCL2A1Q16548 175 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 RAET1LQ5VY80 246 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 FAM71E1Q6IPT2 247 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 ZNF474Q6S9Z5 364 aaPredicted RBP10.5□□□□□ -0.73
USP3-220ENST00000561381 Q71RC1 249 aaPredicted RBP10.5□□□□□ -0.73
USP3-220ENST00000561381 TRMT10CQ7L0Y3 403 aaKnown RBP10.5□□□□□ -0.73
USP3-220ENST00000561381 BTLAQ7Z6A9 289 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 LCA5Q86VQ0 697 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 CNEP1R1Q8N9A8 125 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.5□□□□□ -0.73
USP3-220ENST00000561381 MZB1Q8WU39 189 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 WFIKKN1Q96NZ8 548 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 STMN4Q9H169 189 aaPredicted RBP10.5□□□□□ -0.73
USP3-220ENST00000561381 OPN3Q9H1Y3 402 aaPredicted RBP10.5□□□□□ -0.73
USP3-220ENST00000561381 SIRT5Q9NXA8 310 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 KLHL28Q9NXS3 571 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 TBK1Q9UHD2 729 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 C19orf53Q9UNZ5 99 aaPredicted RBP10.5□□□□□ -0.73
USP3-220ENST00000561381 STK38LQ9Y2H1 464 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 ZNF337Q9Y3M9 751 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 TESMINQ9Y4I5 508 aa10.5□□□□□ -0.73
USP3-220ENST00000561381 FLNAP21333 2647 aaKnown RBP10.49□□□□□ -0.73
USP3-220ENST00000561381 A0A087WV62 115 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 SERTM1A2A2V5 107 aa10.49□□□□□ -0.73
USP3-220ENST00000561381 SLC22A20A6NK97 555 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms