RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 IL33O95760 270 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 PTPN6P29350 595 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 CDKN2CP42773 168 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 RFX3P48380 749 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 TRPC1P48995 793 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 PNLIPRP2P54317 469 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 RPS26P62854 115 aaKnown RBP12.69□□□□□ -0.38
TPM1-230ENST00000561266 MRPS22P82650 360 aaKnown RBP12.69□□□□□ -0.38
TPM1-230ENST00000561266 CCNJQ5T5M9 372 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 TIGD3Q6B0B8 471 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 OR5M10Q6IEU7 315 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 FIGNL1Q6PIW4 674 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 PAOXQ6QHF9 649 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 ANGPTL8Q6UXH0 198 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 BNC2Q6ZN30 1099 aaPredicted RBP12.69□□□□□ -0.38
TPM1-230ENST00000561266 RGS9BPQ6ZS82 235 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 OLIG3Q7RTU3 272 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 RPRMLQ8N4K4 120 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 CDRT4Q8N9R6 151 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 CEP70Q8NHQ1 597 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 RFWD2Q8NHY2 731 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 GPR151Q8TDV0 419 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 CDS1Q92903 461 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 TMEM41AQ96HV5 264 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 ZNF597Q96LX8 424 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 PSMG3-AS1Q96PY0 264 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 PRPF18Q99633 342 aaKnown RBP12.69□□□□□ -0.38
TPM1-230ENST00000561266 KLHDC3Q9BQ90 382 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 OSBPL11Q9BXB4 747 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 SLC6A13Q9NSD5 602 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 RYDENQ9NUL5 291 aaKnown RBP12.69□□□□□ -0.38
TPM1-230ENST00000561266 FBXL2Q9UKC9 423 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 BOKQ9UMX3 212 aaPredicted RBP12.69□□□□□ -0.38
TPM1-230ENST00000561266 MAPRE3Q9UPY8 281 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 DOPEY1Q5JWR5 2465 aa12.69□□□□□ -0.38
TPM1-230ENST00000561266 A0A1B0GVC2 190 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 E9PBE3 544 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 NPIPA2E9PIF3 369 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 NPIPA3F8WFD2 350 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 ACOT7O00154 380 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 RNASET2O00584 256 aaKnown RBP12.68□□□□□ -0.38
TPM1-230ENST00000561266 KCNK2O95069 426 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 SNX4O95219 450 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 UTS2O95399 124 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 IL12BP29460 328 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 KIR3DL1P43629 444 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 AQP5P55064 265 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 TP53BP2Q13625 1128 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 SLC10A1Q14973 349 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 GRAMD1BQ3KR37 738 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 PDCD4Q53EL6 469 aaKnown RBP12.68□□□□□ -0.38
TPM1-230ENST00000561266 EIPR1Q53HC9 387 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 TBCELQ5QJ74 424 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 HIST2H2BCQ6DN03 193 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 SLC30A6Q6NXT4 461 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 CDC73Q6P1J9 531 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 OR5D16Q8NGK9 328 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 OR4A15Q8NGL6 344 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 OR4C3Q8NH37 302 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 SSC4DQ8WTU2 575 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 Q9N2J8 555 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 SERHLQ9NQF3 203 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 KLRF1Q9NZS2 232 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 C15orf41Q9Y2V0 281 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 ARHGAP21Q5T5U3 1957 aa12.68□□□□□ -0.38
TPM1-230ENST00000561266 NPIPA5A0A0B4J1W7 369 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 PRSS51A0A1B0GVH4 220 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 KDM4EB2RXH2 506 aaPredicted RBP12.67□□□□□ -0.38
TPM1-230ENST00000561266 NPIPA7E9PJI5 369 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 CCL21O00585 134 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 UBDO15205 165 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 SCO2O43819 266 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 ZG16O60844 167 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 EDF1O60869 148 aaKnown RBP12.67□□□□□ -0.38
TPM1-230ENST00000561266 ALOX5P09917 674 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 NPIPA8P0DM63 369 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 ABOP16442 354 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 GDF1P27539 372 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 S100A3P33764 101 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 EVI2BP34910 448 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 PTGS2P35354 604 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 SOAT1P35610 550 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 PRR5P85299 388 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 ADORA2A-AS1P86434 159 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 EFR3AQ14156 821 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 CDSNQ15517 529 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 ZNHIT3Q15649 155 aaPredicted RBP12.67□□□□□ -0.38
TPM1-230ENST00000561266 DECR1Q16698 335 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 WIPI1Q5MNZ9 446 aaPredicted RBP12.67□□□□□ -0.38
TPM1-230ENST00000561266 DCST1Q5T197 706 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 C6orf120Q7Z4R8 191 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 MARCH3Q86UD3 253 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 CD163Q86VB7 1156 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 PACS2Q86VP3 889 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 FUNDC1Q8IVP5 155 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 MARVELD2Q8N4S9 558 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 NATD1Q8N6N6 113 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 OR5M9Q8NGP3 310 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 OR1J4Q8NGS1 313 aa12.67□□□□□ -0.38
TPM1-230ENST00000561266 FAM57AQ8TBR7 257 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms