RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 RAB40AQ8WXH6 277 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 DNASE1L2Q92874 299 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 DVL3Q92997 716 aaPredicted RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 FCRL2Q96LA5 508 aaPredicted RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 C5orf34Q96MH7 638 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 KCNS3Q9BQ31 491 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 FAM83CQ9BQN1 747 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 XKR8Q9H6D3 395 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 IL1RAPQ9NPH3 570 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ZFP57Q9NU63 452 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 SDHAF2Q9NX18 166 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 COPZ2Q9P299 210 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ING4Q9UNL4 249 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 PLCL2Q9UPR0 1127 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CMAHPQ9Y471 501 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 A0A0A0MRY4 1105 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 LOC100506127A0A0U1RQW1 187 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ACOD1A6NK06 481 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 TARM1B6A8C7 271 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 DNASE2O00115 360 aaPredicted RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 WWP2O00308 870 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CYR61O00622 381 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF821O75541 412 aaPredicted RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ERVK-10P10266 1014 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 RPA2P15927 270 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 EFNA1P20827 205 aaPredicted RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 HTR1EP28566 365 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 EEFSECP57772 596 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 DCDC1P59894 354 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 VPS26BQ4G0F5 336 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 FAM98BQ52LJ0 330 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 PRSS36Q5K4E3 855 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 HES5Q5TA89 166 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 C18orf63Q68DL7 685 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 GHDCQ8N2G8 530 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 SRFBP1Q8NEF9 429 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 OR6S1Q8NH40 331 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 PCNPQ8WW12 178 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 DAZAP1Q96EP5 407 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 TSPAN17Q96FV3 270 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 LRR1Q96L50 414 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 RBP7Q96R05 134 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 NDC1Q9BTX1 674 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 NUSAP1Q9BXS6 441 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 GPR62Q9BZJ7 368 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 S1PR5Q9H228 398 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 RNF167Q9H6Y7 350 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CAB39LQ9H9S4 337 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 GTSE1Q9NYZ3 720 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ABCG2Q9UNQ0 655 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 OOEPA6NGQ2 149 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 FABP7O15540 132 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 FAM20BO75063 409 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CRCPO75575 148 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 LSM8O95777 96 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CH25HO95992 272 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 IL18BPO95998 194 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CALCBP10092 127 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 NID1P14543 1247 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 PAICSP22234 425 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 BMI1P35226 326 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 LCP2Q13094 533 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 TP53BP2Q13625 1128 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 GAMTQ14353 236 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 GRIK4Q16099 956 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 NKPD1Q17RQ9 610 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 SOWAHCQ53LP3 525 aaPredicted RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 PABPC1L2AQ5JQF8 200 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 PDZK1Q5T2W1 519 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ZNF425Q6IV72 752 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 TMEM108Q6UXF1 575 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 TMPRSS11AQ6ZMR5 421 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 PIWIL4Q7Z3Z4 852 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ZDHHC21Q8IVQ6 265 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CYP4Z2PQ8N1L4 340 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 NUP43Q8NFH3 380 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 WBP2Q969T9 261 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 MYLPFQ96A32 169 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 RAD51AP1Q96B01 352 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ATXN7L3BQ96GX2 97 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 ZC3HAV1LQ96H79 300 aaKnown RBP6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 RHNO1Q9BSD3 238 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 C1QTNF1Q9BXJ1 281 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CEP41Q9BYV8 373 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 HAPLN2Q9GZV7 340 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 PIGUQ9H490 435 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 TBC1D17Q9HA65 648 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 MED9Q9NWA0 146 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 PTTG3PQ9NZH4 202 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 CDH9Q9ULB4 789 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 MGAT4AQ9UM21 535 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 FZD1Q9UP38 647 aa6.32□□□□□ -1.4
TSPAN3-209ENST00000560715 E9PAM4 449 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 HS3ST1O14792 307 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 ANKRD28O15084 1053 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 VPS26AO75436 327 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 SPDEFO95238 335 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 HBQ1P09105 142 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 DRD5P21918 477 aa6.31□□□□□ -1.4
TSPAN3-209ENST00000560715 FDXRP22570 491 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms