RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 ALG10BQ5I7T1 473 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 BICRALQ6AI39 1079 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 PTCHD4Q6ZW05 846 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 MARCH3Q86UD3 253 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF595Q8IYB9 648 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ZZZ3Q8IYH5 903 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 FAM86B1Q8N7N1 296 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF321PQ8N8H1 164 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 NAXEQ8NCW5 288 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 OR9Q2Q8NGE9 314 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 C16orf52Q8NHV5 167 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 SLC22A8Q8TCC7 542 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 SLC38A5Q8WUX1 472 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ALPK1Q96QP1 1244 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 PHF12Q96QT6 1004 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 SPOCK3Q9BQ16 436 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 SERHLQ9NQF3 203 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 TBC1D23Q9NUY8 699 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 USE1Q9NZ43 259 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 MED11Q9P086 117 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ACTR3BQ9P1U1 418 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 CBLCQ9ULV8 474 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 AP4B1Q9Y6B7 739 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ANAPC1Q9H1A4 1944 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 MYO7BQ6PIF6 2116 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 TICRRQ7Z2Z1 1910 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 C19orf67A6NJJ6 358 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 RNASET2O00584 256 aaKnown RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 XKRYO14609 159 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 IL33O95760 270 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 FESP07332 822 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ADORA3P0DMS8 318 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 CD46P15529 392 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 PIGAP37287 484 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 LACTB2Q53H82 288 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 TMEM225Q6GV28 225 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 OR2T5Q6IEZ7 315 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 SLC23A3Q6PIS1 610 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 IKBIPQ70UQ0 350 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF605Q86T29 641 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 PDSS2Q86YH6 399 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 OR2T29Q8NH02 315 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 PIGXQ8TBF5 258 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 SLC2A12Q8TD20 617 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ZG16BQ96DA0 208 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 SFXN2Q96NB2 322 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 IER2Q9BTL4 223 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 GALNT9Q9HCQ5 603 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 IKZF2Q9UKS7 526 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 AP3M1Q9Y2T2 418 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 PCDHGA5Q9Y5G8 931 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 SLC22A7Q9Y694 548 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 KIF26BQ2KJY2 2108 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 SH3D21A4FU49 640 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 TTLL8A6PVC2 850 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 CAPN14A8MX76 684 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 TMX2-CTNND1H3BSU7 103 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 EIF1AYO14602 144 aaKnown RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ADAMDEC1O15204 470 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 MITFO75030 526 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 CT62P0C5K7 136 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF806P0C7X5 589 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 GRPRP30550 384 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 GBX1Q14549 363 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 TAF13Q15543 124 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 RUNDC3AQ59EK9 446 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 MRPL2Q5T653 305 aaKnown RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 TMEM236Q5W0B7 351 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 OTPQ5XKR4 325 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF425Q6IV72 752 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 METTL2BQ6P1Q9 378 aaKnown RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 C3P1Q6ZMU1 363 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 CHERPQ8IWX8 916 aaKnown RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 IQCF1Q8N6M8 205 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 CYB561A3Q8NBI2 242 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 OR4D9Q8NGE8 314 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ZFPM2Q8WW38 1151 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 GEMIN6Q8WXD5 167 aaKnown RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF354BQ96LW1 612 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 ZNF184Q99676 751 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 EPS8L2Q9H6S3 715 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 DDX31Q9H8H2 851 aaKnown RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 PRDM9Q9NQV7 894 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 FBXO34Q9NWN3 711 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 P4HTMQ9NXG6 502 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 SLC25A37Q9NYZ2 338 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 IL17BQ9UHF5 180 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 KCND3Q9UK17 655 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 HEMK1Q9Y5R4 338 aaPredicted RBP5.07□□□□□ -1.6
VPS13C-209ENST00000560637 NLRC5Q86WI3 1866 aa5.07□□□□□ -1.6
VPS13C-209ENST00000560637 C4orf51C9J302 202 aa5.06□□□□□ -1.6
VPS13C-209ENST00000560637 UPK1AO00322 258 aa5.06□□□□□ -1.6
VPS13C-209ENST00000560637 DSCR3O14972 297 aa5.06□□□□□ -1.6
VPS13C-209ENST00000560637 DNAJB5O75953 348 aa5.06□□□□□ -1.6
VPS13C-209ENST00000560637 AHSA1O95433 338 aa5.06□□□□□ -1.6
VPS13C-209ENST00000560637 HOXC4P09017 264 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-209ENST00000560637 ATP4BP51164 291 aa5.06□□□□□ -1.6
VPS13C-209ENST00000560637 RHDQ02161 417 aa5.06□□□□□ -1.6
VPS13C-209ENST00000560637 DBPQ10586 325 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms