RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 MYO3AQ8NEV4 1616 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 BTBD17A6NE02 478 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 FOXO6A8MYZ6 492 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 SRPX2O60687 465 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 MITFO75030 526 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 DFFBO76075 338 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 ITGB2P05107 769 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 STT3AP46977 705 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 TAS2R46P59540 309 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 LINC01599Q8WXQ3 324 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 ARSGQ96EG1 525 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 MAP3K3Q99759 626 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 SMIM3Q9BZL3 60 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 MYEF2Q9P2K5 600 aaKnown RBP13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 TSPAN6O43657 245 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 CYTIPO60759 359 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 GBAP04062 536 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 OGFOD3Q6PK18 319 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 CATSPERGQ6ZRH7 1159 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 SENP5Q96HI0 755 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 MUS81Q96NY9 551 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 KCNK2O95069 426 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 TP53P04637 393 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 PROS1P07225 676 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 HLA-EP13747 358 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR10K2Q6IF99 312 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 LRRC55Q6ZSA7 311 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLC35F2Q8IXU6 374 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 CCDC116Q8IYX3 515 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZBTB8AQ96BR9 441 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 LRR1Q96L50 414 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF160Q9HCG1 818 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 SACM1LQ9NTJ5 587 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 PREX2Q70Z35 1606 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 LOC102725191A0A1B0GVB3 256 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 EPOP01588 193 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF546Q86UE3 836 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR5W2Q8NH69 310 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 MIB2Q96AX9 1013 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 GPR160Q9UJ42 338 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 DLGAP4Q9Y2H0 992 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 RNF11Q9Y3C5 154 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 JRKO75564 520 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 CD48P09326 243 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 ARSBP15848 533 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 ETV1P50549 477 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 DUSP3P51452 185 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 GPR50Q13585 617 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 LAPTM4AQ15012 233 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF718Q3SXZ3 478 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 SSX7Q7RTT5 188 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 DMBX1Q8NFW5 382 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR8J1Q8NGP2 316 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 ATXN7L1Q9ULK2 861 aaPredicted RBP13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 RHBDD3Q9Y3P4 386 aa13.18□□□□□ -0.3
CSPG4P12-202ENST00000559989 TAC4Q86UU9 113 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 VSIG10LQ86VR7 867 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 TFGQ92734 400 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 FAM46AQ96IP4 442 aaKnown RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 CENPOQ9BU64 300 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 QRSL1Q9H0R6 528 aaKnown RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 PDE7BQ9NP56 450 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 OSGIN2Q9Y236 505 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 PPP3CBP16298 524 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 MFGE8Q08431 387 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 SBSNQ6UWP8 590 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ESPNLQ6ZVH7 1005 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZDHHC14Q8IZN3 488 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 HORMAD2Q8N7B1 307 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 PINK1Q9BXM7 581 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 FBXL12Q9NXK8 326 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ABCC3O15438 1527 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 GABRR1P24046 479 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 CRHBPP24387 322 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ARL2P36404 184 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 SGSHP51688 502 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 Q1RN00 199 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ADGRF1Q5T601 910 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ZNF776Q68DI1 518 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 MCATQ8IVS2 390 aaKnown RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 LRRC25Q8N386 305 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 KDF1Q8NAX2 398 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 OR52P1PQ8NH57 321 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 MRPL38Q96DV4 380 aaKnown RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 NIPSNAP3BQ9BS92 247 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 PRELID3BQ9Y3B1 194 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ARL2-SNX15V9GYD0 113 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 KRBOX1C9JBD0 128 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 B4GALT5O43286 388 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 HRH2P25021 359 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 SOX3P41225 446 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 PRPS1P60891 318 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 FLI1Q01543 452 aaPredicted RBP13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ABHD11Q8NFV4 315 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 ISYNA1Q9NPH2 558 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 SLC39A9Q9NUM3 307 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 C1orf123Q9NWV4 160 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 STSP08842 583 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 KLRK1P26718 216 aa13.17□□□□□ -0.3
CSPG4P12-202ENST00000559989 LAP3P28838 519 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms