RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 PNMTP11086 282 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 SLC2A2P11168 524 aaPredicted RBP3.06□□□□□ -1.92
SPG11-218ENST00000559754 CPN1P15169 458 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 CYP11B1P15538 503 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 MX1P20591 662 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 KRTAP5-9P26371 169 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 CYLC1P35663 651 aaPredicted RBP3.06□□□□□ -1.92
SPG11-218ENST00000559754 CCT6AP40227 531 aaKnown RBP3.06□□□□□ -1.92
SPG11-218ENST00000559754 TSFMP43897 325 aaKnown RBP3.06□□□□□ -1.92
SPG11-218ENST00000559754 MAP2K1Q02750 393 aaPredicted RBP3.06□□□□□ -1.92
SPG11-218ENST00000559754 GUCY2DQ02846 1103 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 FGL1Q08830 312 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 PJVKQ0ZLH3 352 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 BST1Q10588 318 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 SRSF9Q13242 221 aaKnown RBP eCLIP3.06□□□□□ -1.92
SPG11-218ENST00000559754 PEX6Q13608 980 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 MESDQ14696 234 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 CDKN3Q16667 212 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 PCK2Q16822 640 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 HADHQ16836 314 aaKnown RBP3.06□□□□□ -1.92
SPG11-218ENST00000559754 BCL7AQ4VC05 210 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 PRAMEF5Q5TYX0 476 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 PRAMEF6Q5VXH4 476 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 OR4C11Q6IEV9 310 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 TMEM207Q6UWW9 146 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 SLC24A5Q71RS6 500 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 ASRGL1Q7L266 308 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 FCRLAQ7L513 359 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 BIVMQ86UB2 503 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 RANBP3LQ86VV4 465 aaPredicted RBP3.06□□□□□ -1.92
SPG11-218ENST00000559754 VSTM4Q8IW00 320 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 EFCAB13Q8IY85 973 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 Q8N377 158 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 ARFGAP2Q8N6H7 521 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 NFAM1Q8NET5 270 aaPredicted RBP3.06□□□□□ -1.92
SPG11-218ENST00000559754 NUP37Q8NFH4 326 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 OR5D13Q8NGL4 314 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 SLC22A8Q8TCC7 542 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 PEX13Q92968 403 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 AKR1E2Q96JD6 320 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 CCDC7Q96M83 1385 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 IL12RB2Q99665 862 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 NKX3-1Q99801 234 aaPredicted RBP3.06□□□□□ -1.92
SPG11-218ENST00000559754 SOSTQ9BQB4 213 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 RHOXF2Q9BQY4 288 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 NLNQ9BYT8 704 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 SHARPINQ9H0F6 387 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 ELOVL3Q9HB03 270 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 RPRD1BQ9NQG5 326 aaKnown RBP3.06□□□□□ -1.92
SPG11-218ENST00000559754 STARD5Q9NSY2 213 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 PIPOXQ9P0Z9 390 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 POLKQ9UBT6 870 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.06□□□□□ -1.92
SPG11-218ENST00000559754 TRAF3IP3Q9Y228 551 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 PPP2R2CQ9Y2T4 447 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 KLHDC2Q9Y2U9 406 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 WDR45Q9Y484 360 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 WIPI2Q9Y4P8 454 aa3.06□□□□□ -1.92
SPG11-218ENST00000559754 TMEM94Q12767 1356 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 SH3PXD2BA1X283 911 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 METTL21EPA6NDL7 271 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 WASHC1A8K0Z3 465 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 EPM2AB3EWF7 344 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 M0QX08 132 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 WRBO00258 174 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 SAP30O75446 220 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 SCGNO76038 276 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 FCER2P06734 321 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 GSTA1P08263 222 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 STAG3L3P0CL85 134 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 MBL2P11226 248 aaPredicted RBP3.05□□□□□ -1.92
SPG11-218ENST00000559754 UQCRC2P22695 453 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 FNTAP49354 379 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 ETV1P50549 477 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 SGSHP51688 502 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 NDST1P52848 882 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 CDH4P55283 916 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 KLF5Q13887 457 aaPredicted RBP3.05□□□□□ -1.92
SPG11-218ENST00000559754 IL18Q14116 193 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 EXT1Q16394 746 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 SYPL1Q16563 259 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 C3AR1Q16581 482 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 ZNF699Q32M78 642 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 SLC25A53Q5H9E4 307 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 DDI2Q5TDH0 399 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 CARD17Q5XLA6 110 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 ZSCAN25Q6NSZ9 544 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 P4HA3Q7Z4N8 544 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 TMCO2Q7Z6W1 182 aaPredicted RBP3.05□□□□□ -1.92
SPG11-218ENST00000559754 PAQR7Q86WK9 346 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 CACUL1Q86Y37 369 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 LRRC43Q8N309 656 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 GPR137CQ8N3F9 429 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 Q8NBF4 154 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 GATAD1Q8WUU5 269 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 SMPDL3AQ92484 453 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 PIGCQ92535 297 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 PRICKLE1Q96MT3 831 aaPredicted RBP3.05□□□□□ -1.92
SPG11-218ENST00000559754 BCL7BQ9BQE9 202 aa3.05□□□□□ -1.92
SPG11-218ENST00000559754 NUP58Q9BVL2 599 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms