RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 LRRC39Q96DD0 335 aa9.64□□□□□ -0.87
TRAF3-207ENST00000559734 GMPPAQ96IJ6 420 aaPredicted RBP9.64□□□□□ -0.87
TRAF3-207ENST00000559734 SERPINI1Q99574 410 aa9.64□□□□□ -0.87
TRAF3-207ENST00000559734 TRAF4Q9BUZ4 470 aaPredicted RBP9.64□□□□□ -0.87
TRAF3-207ENST00000559734 MANSC1Q9H8J5 431 aa9.64□□□□□ -0.87
TRAF3-207ENST00000559734 NGBQ9NPG2 151 aa9.64□□□□□ -0.87
TRAF3-207ENST00000559734 ZNF639Q9UID6 485 aa9.64□□□□□ -0.87
TRAF3-207ENST00000559734 GPR55Q9Y2T6 319 aaPredicted RBP9.64□□□□□ -0.87
TRAF3-207ENST00000559734 RNF11Q9Y3C5 154 aa9.64□□□□□ -0.87
TRAF3-207ENST00000559734 OR10H1Q9Y4A9 318 aa9.64□□□□□ -0.87
TRAF3-207ENST00000559734 PCDHA9Q9Y5H5 950 aa9.64□□□□□ -0.87
TRAF3-207ENST00000559734 C1orf226A1L170 272 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 SPRY1O43609 319 aaPredicted RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 LMX1BO60663 402 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 KERAO60938 352 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 SS18L1O75177 396 aaPredicted RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 SEMA3DO95025 777 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 SYNGR4O95473 234 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 FESP07332 822 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 GFAPP14136 432 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 PSMB1P20618 241 aaKnown RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 RAB10P61026 200 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 VLDLRP98155 873 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 DR1Q01658 176 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 BSPH1Q075Z2 132 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 GANABQ14697 944 aaKnown RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 MORF4L2Q15014 288 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 NRF1Q16656 503 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 CYB5R2Q6BCY4 276 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 SLC48A1Q6P1K1 146 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 NPSR1Q6W5P4 371 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 PAGE2Q7Z2X7 111 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 SLC44A2Q8IWA5 706 aaPredicted RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 UHMK1Q8TAS1 419 aaKnown RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 WDR20Q8TBZ3 569 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 ROBO4Q8WZ75 1007 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 ANP32BQ92688 251 aaKnown RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 HTRA1Q92743 480 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 ADAD1Q96M93 576 aaKnown RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 CDK15Q96Q40 435 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 ATOH8Q96SQ7 321 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 NAPGQ99747 312 aaPredicted RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 LRRC1Q9BTT6 524 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 MRPL1Q9BYD6 325 aaKnown RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 OR10A4Q9H209 315 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 PTGES2Q9H7Z7 377 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 ZBTB26Q9HCK0 441 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 TMEM160Q9NX00 188 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 XPR1Q9UBH6 696 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 MCTS1Q9ULC4 181 aaKnown RBP9.63□□□□□ -0.87
TRAF3-207ENST00000559734 PYCARDQ9ULZ3 195 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 TSC22D4Q9Y3Q8 395 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 SNX8Q9Y5X2 465 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 SAR1BQ9Y6B6 198 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 AP4B1Q9Y6B7 739 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 ZNF780BQ9Y6R6 833 aa9.63□□□□□ -0.87
TRAF3-207ENST00000559734 A0A096LNT2 108 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 CXorf49A8MYA2 514 aaPredicted RBP9.62□□□□□ -0.87
TRAF3-207ENST00000559734 LINC01387J3KSC0 135 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 FOXE1O00358 373 aaPredicted RBP9.62□□□□□ -0.87
TRAF3-207ENST00000559734 GUCY1B2O75343 617 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 NTN1O95631 604 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 ESRRBO95718 433 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 OPN1LWP04000 364 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 CT45A8P0DMV1 189 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 CT45A9P0DMV2 189 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 IGHV4-31P0DP07 118 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 IGFBP5P24593 272 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 RFX3P48380 749 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 PNLIPRP2P54317 469 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 CDH11P55287 796 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 C21orf58P58505 322 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 MRPS22P82650 360 aaKnown RBP9.62□□□□□ -0.87
TRAF3-207ENST00000559734 LOXL1Q08397 574 aaPredicted RBP9.62□□□□□ -0.87
TRAF3-207ENST00000559734 ZNF155Q12901 538 aaPredicted RBP9.62□□□□□ -0.87
TRAF3-207ENST00000559734 DLG1Q12959 904 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 GTF2H2Q13888 395 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 TAB1Q15750 504 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 PFKFB4Q16877 469 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 ERCC6LQ2NKX8 1250 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 CT45A2Q5DJT8 189 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 SGO1Q5FBB7 561 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 LIPNQ5VXI9 398 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 TTC19Q6DKK2 380 aaPredicted RBP9.62□□□□□ -0.87
TRAF3-207ENST00000559734 GTF2H2CQ6P1K8 395 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 FIGNL1Q6PIW4 674 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 GOLGA7Q7Z5G4 137 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 CMC1Q7Z7K0 106 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 TBC1D1Q86TI0 1168 aaPredicted RBP9.62□□□□□ -0.87
TRAF3-207ENST00000559734 ISCA2Q86U28 154 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 GGNQ86UU5 652 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 ZNF525Q8N782 197 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 OR4N2Q8NGD1 307 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 OR52B6Q8NGF0 335 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 OR10D3Q8NH80 312 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 CDKL2Q92772 493 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 KAT2AQ92830 837 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 ATP6V1E2Q96A05 226 aa9.62□□□□□ -0.87
TRAF3-207ENST00000559734 C11orf24Q96F05 449 aaPredicted RBP9.62□□□□□ -0.87
TRAF3-207ENST00000559734 UBXN10Q96LJ8 280 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms