RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 ZNF566Q969W8 418 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 TMIGD2Q96BF3 282 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 STACQ99469 402 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 SAP130Q9H0E3 1048 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 CXorf56Q9H5V9 222 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 PAPOLBQ9NRJ5 636 aaKnown RBP12.05□□□□□ -0.48
SMAD3-207ENST00000558763 LANCL2Q9NS86 450 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 FBXO34Q9NWN3 711 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 PAK1IP1Q9NWT1 392 aaPredicted RBP12.05□□□□□ -0.48
SMAD3-207ENST00000558763 TOR4AQ9NXH8 423 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 KCNE5Q9UJ90 142 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 MKLN1Q9UL63 735 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 SATB2Q9UPW6 733 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 PCDHGA6Q9Y5G7 932 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 HSPE1-MOB4S4R3N1 261 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 CEP250Q9BV73 2442 aa12.05□□□□□ -0.48
SMAD3-207ENST00000558763 PTPRZ1P23471 2315 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-207ENST00000558763 SPAARA0A1B0GVQ0 90 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 FRS3O43559 492 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 CCNB2O95067 398 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 GASTP01350 101 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 ALPPP05187 535 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 FOLR1P15328 257 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 CDH2P19022 906 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-207ENST00000558763 PRKAR1BP31321 381 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 RPS6KA3P51812 740 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 EFNA3P52797 238 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 SKP1P63208 163 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 RPP38P78345 283 aaKnown RBP12.04□□□□□ -0.48
SMAD3-207ENST00000558763 PLAURQ03405 335 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 GRM7Q14831 915 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF311Q5JNZ3 666 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 RBM48Q5RL73 367 aaKnown RBP12.04□□□□□ -0.48
SMAD3-207ENST00000558763 CCNJQ5T5M9 372 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 PRAMEF17Q5VTA0 474 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 ZCCHC12Q6PEW1 402 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 MED25Q71SY5 747 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 SLITRK4Q8IW52 837 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 CLIP4Q8N3C7 705 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 AQP11Q8NBQ7 271 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 OR51Q1Q8NH59 317 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 ADAMTS18Q8TE60 1221 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 APH1BQ8WW43 257 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 PIK3R3Q92569 461 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 MMABQ96EY8 250 aaPredicted RBP12.04□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF768Q9H5H4 540 aaKnown RBP12.04□□□□□ -0.48
SMAD3-207ENST00000558763 SLC9A8Q9Y2E8 581 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 POFUT2Q9Y2G5 429 aa12.04□□□□□ -0.48
SMAD3-207ENST00000558763 A0A1W2PRQ8 180 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 BLACEA4D250 179 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 CLDN24A6NM45 220 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 TMEM150CB9EJG8 249 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 SLC1A7O00341 560 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF749O43361 778 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 WBP4O75554 376 aaKnown RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 NKX2-2O95096 273 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 H1F0P07305 194 aaKnown RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 MAOAP21397 527 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 EMDP50402 254 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 MAPK10P53779 464 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 LSM11P83369 360 aaKnown RBP eCLIP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 SLC13A2Q13183 592 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 DGCR6Q14129 220 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 MAD2L1BPQ15013 274 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 MAPK14Q16539 360 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 DCST2Q5T1A1 773 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 BORAQ6PGQ7 559 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 KLHL17Q6TDP4 642 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 GALNT12Q8IXK2 581 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 OR52R1Q8NGF1 315 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 UBE2FQ969M7 185 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 PRRC1Q96M27 445 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 DPYSL5Q9BPU6 564 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 PRTFDC1Q9NRG1 225 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 CUTCQ9NTM9 273 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 IRAK4Q9NWZ3 460 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF443Q9Y2A4 671 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 DTX4Q9Y2E6 619 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 WDR45Q9Y484 360 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 GMPPBQ9Y5P6 360 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 COL27A1Q8IZC6 1860 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 GXYLT2A0PJZ3 443 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 SH3PXD2BA1X283 911 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 AGAP5A6NIR3 686 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 TOX3O15405 576 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 KIAA0513O60268 411 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 OR2B3O76000 313 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 CLPSP04118 112 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 EEF1A1P68104 462 aaKnown RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 PSG6Q00889 435 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 INSM1Q01101 510 aaPredicted RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ILKQ13418 452 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 CNPY1Q3B7I2 92 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF773Q6PK81 442 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 DHRS13Q6UX07 377 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ZNF836Q6ZNA1 936 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 RBM44Q6ZP01 1051 aaKnown RBP12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ARHGAP22Q7Z5H3 698 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ZAR1Q86SH2 424 aa12.03□□□□□ -0.48
SMAD3-207ENST00000558763 ENTHD1Q8IYW4 607 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms