RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 PDSS2Q86YH6 399 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF295-AS1Q8N0V1 137 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 ICA1LQ8NDH6 482 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 TRPV3Q8NET8 790 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 OR52B6Q8NGF0 335 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 CPT1CQ8TCG5 803 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 CORO2AQ92828 525 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 RFKQ969G6 155 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 RAB24Q969Q5 203 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 FAM162AQ96A26 154 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 NMD3Q96D46 503 aaKnown RBP3.82□□□□□ -1.8
ZEB1-212ENST00000558655 NXPE2Q96DL1 559 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 MED30Q96HR3 178 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 FRG2BQ96QU4 278 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 OR2A5Q96R48 311 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 SERPINI1Q99574 410 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 TSC22D3Q99576 134 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 C1orf50Q9BV19 199 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 MS4A8Q9BY19 250 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 ZNF385DQ9H6B1 395 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 SOX17Q9H6I2 414 aaPredicted RBP3.82□□□□□ -1.8
ZEB1-212ENST00000558655 SEMA4BQ9NPR2 832 aaPredicted RBP3.82□□□□□ -1.8
ZEB1-212ENST00000558655 STARD5Q9NSY2 213 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 DDX28Q9NUL7 540 aaKnown RBP3.82□□□□□ -1.8
ZEB1-212ENST00000558655 ATP6V1HQ9UI12 483 aa3.82□□□□□ -1.8
ZEB1-212ENST00000558655 GPC6Q9Y625 555 aaPredicted RBP3.82□□□□□ -1.8
ZEB1-212ENST00000558655 KNL1Q8NG31 2342 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 IGHV5-10-1A0A0J9YXX1 117 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PRORSD1PA6NEY8 169 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 CCDC160A6NGH7 325 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ISM1B1AKI9 464 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 CAPN5O15484 640 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TBX19O60806 448 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 OR4F21O95013 312 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 RPLP0P05388 317 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ALDOCP09972 364 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 FGF5P12034 268 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 NCK1P16333 377 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 AMD1P17707 334 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 POLR2CP19387 275 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PSMB5P28074 263 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 GRK5P34947 590 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PSMB10P40306 273 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 HNRNPFP52597 415 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PDX1P52945 283 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 MTTPP55157 894 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TMPRSS3P57727 454 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 HSD11B2P80365 405 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 FOLH1Q04609 750 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 HYAL2Q12891 473 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SLBPQ14493 270 aaKnown RBP eCLIP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 RBBP7Q16576 425 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 VPS26BQ4G0F5 336 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 XKR6Q5GH73 641 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 MTX3Q5HYI7 312 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 CATSPEREQ5SY80 951 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 METTL21CQ5VZV1 264 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 VN1R4Q7Z5H5 301 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 STX12Q86Y82 276 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 BMPERQ8N8U9 685 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 OR7G3Q8NG95 312 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 RHBDD1Q8TEB9 315 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PYCR2Q96C36 320 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TEX37Q96LM6 180 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 QRFPRQ96P65 431 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 NR1H4Q96RI1 486 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 GFM1Q96RP9 751 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PRPF18Q99633 342 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 NRTNQ99748 197 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 AIFM2Q9BRQ8 373 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 DPH7Q9BTV6 452 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 GRIP2Q9C0E4 1043 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SPNS1Q9H2V7 528 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TUBB1Q9H4B7 451 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 METTL7AQ9H8H3 244 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ACTR8Q9H981 624 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 LIN7BQ9HAP6 207 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 BATF3Q9NR55 127 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 FBXO8Q9NRD0 319 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SLAMF8Q9P0V8 285 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PLCL2Q9UPR0 1127 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 RNF11Q9Y3C5 154 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 DNAJC15Q9Y5T4 150 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 GOLGA4Q13439 2230 aaKnown RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 BTBD17A6NE02 478 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SAC3D1A6NKF1 404 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SLC22A31A6NKX4 558 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ANGPT2O15123 496 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SLC22A2O15244 555 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 HYAL3O43820 417 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 CTSVO60911 334 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 CLPXO76031 633 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 TK1P04183 234 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 CAPN1P07384 714 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 IFI6P09912 130 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 ST6GAL1P15907 406 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 FUT4P22083 530 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 PTX3P26022 381 aaPredicted RBP3.81□□□□□ -1.8
ZEB1-212ENST00000558655 SLC7A1P30825 629 aa3.81□□□□□ -1.8
ZEB1-212ENST00000558655 GRK3P35626 688 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms