RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 P04436 131 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 OR12D1P0DN82 309 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 CYP4B1P13584 511 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 PNLIPRP2P54317 469 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 PSMD4P55036 377 aaKnown RBP16.02■□□□□ 0.16
TPM1-214ENST00000558544 PMP22Q01453 160 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 NFYCQ13952 458 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 MMEL1Q495T6 779 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 COX20Q5RI15 118 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.02■□□□□ 0.16
TPM1-214ENST00000558544 BICRALQ6AI39 1079 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 NUP54Q7Z3B4 507 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 FBXW8Q8N3Y1 598 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 DPP10Q8N608 796 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 SPPL2AQ8TCT8 520 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 RAB8BQ92930 207 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 NODALQ96S42 347 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 DEPPQ9NTK1 212 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 FBXO34Q9NWN3 711 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 VAPAQ9P0L0 249 aa16.02■□□□□ 0.16
TPM1-214ENST00000558544 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.02■□□□□ 0.16
TPM1-214ENST00000558544 CNOT11Q9UKZ1 510 aaKnown RBP16.02■□□□□ 0.16
TPM1-214ENST00000558544 TRBV5-3A0A0A0MS03 114 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 DUXAA6NLW8 204 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 BBIP1A8MTZ0 92 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 NDUFAB1O14561 156 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 ABCB7O75027 752 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 ICOSLGO75144 302 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 DCTN3O75935 186 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 C1QL1O75973 258 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 COX4I1P13073 169 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 MEOX1P50221 254 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 RPP38P78345 283 aaKnown RBP16.01■□□□□ 0.15
TPM1-214ENST00000558544 CYLC2Q14093 348 aaPredicted RBP16.01■□□□□ 0.15
TPM1-214ENST00000558544 EFR3AQ14156 821 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 DCST2Q5T1A1 773 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 DLEU7Q6UYE1 221 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.01■□□□□ 0.15
TPM1-214ENST00000558544 SULF2Q8IWU5 870 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 ZNF843Q8N446 348 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 CCDC197Q8NCU1 140 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 FAM110BQ8TC76 370 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 XAGE5Q8WWM1 108 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 FLRT3Q9NZU0 649 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 CNIH4Q9P003 139 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 PCDHGB3Q9Y5G1 929 aa16.01■□□□□ 0.15
TPM1-214ENST00000558544 CLIC1O00299 241 aa16■□□□□ 0.15
TPM1-214ENST00000558544 HMGN4O00479 90 aa16■□□□□ 0.15
TPM1-214ENST00000558544 MRASO14807 208 aa16■□□□□ 0.15
TPM1-214ENST00000558544 ASNA1O43681 348 aa16■□□□□ 0.15
TPM1-214ENST00000558544 PEX1O43933 1283 aa16■□□□□ 0.15
TPM1-214ENST00000558544 UNC5CO95185 931 aa16■□□□□ 0.15
TPM1-214ENST00000558544 RASAL1O95294 804 aa16■□□□□ 0.15
TPM1-214ENST00000558544 CRATP43155 626 aa16■□□□□ 0.15
TPM1-214ENST00000558544 DNASE1L1P49184 302 aa16■□□□□ 0.15
TPM1-214ENST00000558544 MVDP53602 400 aa16■□□□□ 0.15
TPM1-214ENST00000558544 PRR30Q53SZ7 412 aaPredicted RBP16■□□□□ 0.15
TPM1-214ENST00000558544 COQ5Q5HYK3 327 aa16■□□□□ 0.15
TPM1-214ENST00000558544 RPUSD3Q6P087 351 aaKnown RBP16■□□□□ 0.15
TPM1-214ENST00000558544 ZAR1Q86SH2 424 aa16■□□□□ 0.15
TPM1-214ENST00000558544 ANKS4BQ8N8V4 417 aa16■□□□□ 0.15
TPM1-214ENST00000558544 FAM98AQ8NCA5 519 aaKnown RBP16■□□□□ 0.15
TPM1-214ENST00000558544 OR52N2Q8NGI0 321 aa16■□□□□ 0.15
TPM1-214ENST00000558544 DNAJB8Q8NHS0 232 aa16■□□□□ 0.15
TPM1-214ENST00000558544 RP9Q8TA86 221 aaKnown RBP16■□□□□ 0.15
TPM1-214ENST00000558544 TMCO6Q96DC7 493 aa16■□□□□ 0.15
TPM1-214ENST00000558544 SECISBP2Q96T21 854 aaKnown RBP16■□□□□ 0.15
TPM1-214ENST00000558544 METTL7AQ9H8H3 244 aa16■□□□□ 0.15
TPM1-214ENST00000558544 KLRF1Q9NZS2 232 aa16■□□□□ 0.15
TPM1-214ENST00000558544 PINLYPA6NC86 204 aa16■□□□□ 0.15
TPM1-214ENST00000558544 PRAMEF25A6NGN4 478 aa16■□□□□ 0.15
TPM1-214ENST00000558544 TTLL8A6PVC2 850 aa16■□□□□ 0.15
TPM1-214ENST00000558544 KLRC4-KLRK1H3BQV0 150 aa16■□□□□ 0.15
TPM1-214ENST00000558544 HS6ST1O60243 411 aa16■□□□□ 0.15
TPM1-214ENST00000558544 SOX30O94993 753 aa16■□□□□ 0.15
TPM1-214ENST00000558544 AGR2O95994 175 aa16■□□□□ 0.15
TPM1-214ENST00000558544 FREM3P0C091 2139 aa16■□□□□ 0.15
TPM1-214ENST00000558544 ETFAP13804 333 aa16■□□□□ 0.15
TPM1-214ENST00000558544 CNR1P21554 472 aa16■□□□□ 0.15
TPM1-214ENST00000558544 RFC3P40938 356 aa16■□□□□ 0.15
TPM1-214ENST00000558544 CASP3P42574 277 aa16■□□□□ 0.15
TPM1-214ENST00000558544 ANXA11P50995 505 aaKnown RBP16■□□□□ 0.15
TPM1-214ENST00000558544 KCNJ2P63252 427 aa16■□□□□ 0.15
TPM1-214ENST00000558544 FUT5Q11128 374 aa16■□□□□ 0.15
TPM1-214ENST00000558544 STX5Q13190 355 aa16■□□□□ 0.15
TPM1-214ENST00000558544 CAPRIN1Q14444 709 aaKnown RBP16■□□□□ 0.15
TPM1-214ENST00000558544 INAQ16352 499 aa16■□□□□ 0.15
TPM1-214ENST00000558544 CPEB4Q17RY0 729 aaKnown RBP eCLIP16■□□□□ 0.15
TPM1-214ENST00000558544 TRMT5Q32P41 509 aaKnown RBP16■□□□□ 0.15
TPM1-214ENST00000558544 ATAD3BQ5T9A4 648 aa16■□□□□ 0.15
TPM1-214ENST00000558544 OLIG3Q7RTU3 272 aa16■□□□□ 0.15
TPM1-214ENST00000558544 C16orf62Q7Z3J2 963 aa16■□□□□ 0.15
TPM1-214ENST00000558544 CISD2Q8N5K1 135 aaKnown RBP16■□□□□ 0.15
TPM1-214ENST00000558544 OR2M7Q8NG81 312 aa16■□□□□ 0.15
TPM1-214ENST00000558544 RCN3Q96D15 328 aa16■□□□□ 0.15
TPM1-214ENST00000558544 LRRC37BQ96QE4 947 aa16■□□□□ 0.15
TPM1-214ENST00000558544 TAAR6Q96RI8 345 aa16■□□□□ 0.15
TPM1-214ENST00000558544 CGREF1Q99674 301 aa16■□□□□ 0.15
TPM1-214ENST00000558544 G6PC3Q9BUM1 346 aa16■□□□□ 0.15
TPM1-214ENST00000558544 OSBPL11Q9BXB4 747 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms