RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 PRSS1P07477 247 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 AHRP35869 848 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 SLC15A1P46059 708 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 SUOXP51687 545 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 SNTB1Q13884 538 aaKnown RBP5.14□□□□□ -1.59
RTF1-204ENST00000558117 C2orf76Q3KRA6 126 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 AGAP7PQ5VUJ5 663 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 PM20D1Q6GTS8 502 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 FAM198BQ6UWH4 519 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 ARSKQ6UWY0 536 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 PLEKHM3Q6ZWE6 761 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 ZNF534Q76KX8 674 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 PIWIL4Q7Z3Z4 852 aaKnown RBP5.14□□□□□ -1.59
RTF1-204ENST00000558117 CCAR2Q8N163 923 aaKnown RBP5.14□□□□□ -1.59
RTF1-204ENST00000558117 GBGT1Q8N5D6 347 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 C10orf53Q8N6V4 93 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 LRRC17Q8N6Y2 441 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 KIF18AQ8NI77 898 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 SLC37A2Q8TED4 501 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 FBXO17Q96EF6 278 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 OXNAD1Q96HP4 312 aaPredicted RBP5.14□□□□□ -1.59
RTF1-204ENST00000558117 AGAP4Q96P64 663 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 TMEM237Q96Q45 408 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 SEMA6AQ9H2E6 1030 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 MMADHCQ9H3L0 296 aaPredicted RBP5.14□□□□□ -1.59
RTF1-204ENST00000558117 ZSCAN16Q9H4T2 348 aaPredicted RBP5.14□□□□□ -1.59
RTF1-204ENST00000558117 UPF2Q9HAU5 1272 aaKnown RBP5.14□□□□□ -1.59
RTF1-204ENST00000558117 P4HTMQ9NXG6 502 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 HMGXB4Q9UGU5 601 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 RARRES3Q9UL19 164 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 PTRH2Q9Y3E5 179 aaKnown RBP5.14□□□□□ -1.59
RTF1-204ENST00000558117 DNAH1Q9P2D7 4330 aa5.14□□□□□ -1.59
RTF1-204ENST00000558117 NOTCH3Q9UM47 2321 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 OR2M5A3KFT3 312 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 GOLGA8IPA6NC78 632 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 GOLGA8JA6NMD2 632 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 PLOD2O00469 737 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 SYNGR3O43761 229 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 KLF7O75840 302 aaPredicted RBP5.13□□□□□ -1.59
RTF1-204ENST00000558117 IGHV4-39P01824 125 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 HOXC4P09017 264 aaPredicted RBP5.13□□□□□ -1.59
RTF1-204ENST00000558117 PVRP15151 417 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 FOLR1P15328 257 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 NR2F2P24468 414 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 TNFSF10P50591 281 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 CTSCP53634 463 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 UBASH3AP57075 661 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 LINC01547P58512 204 aaPredicted RBP5.13□□□□□ -1.59
RTF1-204ENST00000558117 YBEYP58557 167 aaPredicted RBP5.13□□□□□ -1.59
RTF1-204ENST00000558117 MORF4L2Q15014 288 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 MEP1AQ16819 746 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 TYSND1Q2T9J0 566 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 LGI2Q8N0V4 545 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 SFRP1Q8N474 314 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 MAPK1IP1LQ8NDC0 245 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 SAT2Q96F10 170 aaPredicted RBP5.13□□□□□ -1.59
RTF1-204ENST00000558117 AK8Q96MA6 479 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 DDOQ99489 341 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 NAA11Q9BSU3 229 aaPredicted RBP5.13□□□□□ -1.59
RTF1-204ENST00000558117 ZNF696Q9H7X3 374 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 RCC2Q9P258 522 aaKnown RBP5.13□□□□□ -1.59
RTF1-204ENST00000558117 TCF19Q9Y242 345 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 DOCK10Q96BY6 2186 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 MYH11P35749 1972 aa5.13□□□□□ -1.59
RTF1-204ENST00000558117 ROS1P08922 2347 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 IGLV5-45A0A087WSX0 123 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 TRAV34A0A0B4J273 112 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 TRAV17A0A0B4J275 112 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 A0A1W2PPR1 153 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 A4D1N5 150 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 CACNB4O00305 520 aaPredicted RBP5.12□□□□□ -1.59
RTF1-204ENST00000558117 SNAP91O60641 907 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 CTSVO60911 334 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 VENTXO95231 258 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 EML2O95834 649 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 PCCBP05166 539 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 GAP43P17677 238 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 NELFEP18615 380 aaKnown RBP5.12□□□□□ -1.59
RTF1-204ENST00000558117 RORAP35398 523 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 GSDMDP57764 484 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 KRTAP10-6P60371 365 aaPredicted RBP5.12□□□□□ -1.59
RTF1-204ENST00000558117 MYL6P60660 151 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 GAGE5Q13069 117 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 GAGE6Q13070 117 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 MFAP5Q13361 173 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 NFATC2Q13469 925 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 LASP1Q14847 261 aaKnown RBP5.12□□□□□ -1.59
RTF1-204ENST00000558117 NCF4Q15080 339 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 LRRC73Q5JTD7 316 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 BSPRYQ5W0U4 402 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 C22orf39Q6P5X5 142 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 LINC00696Q6ZRV3 163 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 PRSS42Q7Z5A4 293 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 CCDC71Q8IV32 467 aaPredicted RBP5.12□□□□□ -1.59
RTF1-204ENST00000558117 C1orf52Q8N6N3 182 aaKnown RBP5.12□□□□□ -1.59
RTF1-204ENST00000558117 CXorf40AQ8TE69 158 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 RNF139Q8WU17 664 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 TMCO6Q96DC7 493 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 GPR137Q96N19 417 aa5.12□□□□□ -1.59
RTF1-204ENST00000558117 DGAT2Q96PD7 388 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms