RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 MYO18BQ8IUG5 2567 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 NINQ8N4C6 2090 aa12.57□□□□□ -0.4
SHMT2-234ENST00000557703 ANGPT2O15123 496 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 UGT2B11O75310 529 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 KCNK2O95069 426 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 PRB1P04280 392 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 CCL3P10147 92 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 ACP2P11117 423 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 ZNF24P17028 368 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 EFNA1P20827 205 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-234ENST00000557703 ATP6V1C1P21283 382 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 KHKP50053 298 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 MEOX1P50221 254 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 FBXW4P57775 412 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 ALDH6A1Q02252 535 aaKnown RBP12.56□□□□□ -0.4
SHMT2-234ENST00000557703 TLE1Q04724 770 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 STX5Q13190 355 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 DUSP5Q16690 384 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 C6orf10Q5SRN2 563 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 PRICKLE2Q7Z3G6 844 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.56□□□□□ -0.4
SHMT2-234ENST00000557703 ZNF527Q8NB42 609 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 ST6GALNAC3Q8NDV1 305 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 ZFP90Q8TF47 636 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 NUDT8Q8WV74 236 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 JADE3Q92613 823 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 VPS33AQ96AX1 596 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 MIB2Q96AX9 1013 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 ZNF597Q96LX8 424 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 DOHHQ9BU89 302 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 METTL7AQ9H8H3 244 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 SAR1AQ9NR31 198 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 UBQLN4Q9NRR5 601 aa12.56□□□□□ -0.4
SHMT2-234ENST00000557703 MRPS18CQ9Y3D5 142 aaKnown RBP12.56□□□□□ -0.4
SHMT2-234ENST00000557703 SEC23IPQ9Y6Y8 1000 aaKnown RBP12.56□□□□□ -0.4
SHMT2-234ENST00000557703 ESPL1Q14674 2120 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 A0A1W2PQD3 144 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 TMEM247A6NEH6 219 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 PRAMEF25A6NGN4 478 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 TRIM3O75382 744 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-234ENST00000557703 STX11O75558 287 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 CBR3O75828 277 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 GLSO94925 669 aaPredicted RBP12.55□□□□□ -0.4
SHMT2-234ENST00000557703 HPGDP15428 266 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 TBXA2RP21731 343 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 DRD4P21917 467 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 PTPN6P29350 595 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 FOXO1Q12778 655 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 NNATQ16517 81 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 ARHGAP11BQ3KRB8 267 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 HEPHL1Q6MZM0 1159 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 MTERF4Q7Z6M4 381 aaKnown RBP12.55□□□□□ -0.4
SHMT2-234ENST00000557703 PIGWQ7Z7B1 504 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 METTL25Q8N6Q8 603 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 ANKS4BQ8N8V4 417 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 RP9Q8TA86 221 aaKnown RBP12.55□□□□□ -0.4
SHMT2-234ENST00000557703 C16orf58Q96GQ5 468 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 OR7D2Q96RA2 312 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 TAAR6Q96RI8 345 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 SH3GL1Q99961 368 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 ELAC2Q9BQ52 826 aaKnown RBP12.55□□□□□ -0.4
SHMT2-234ENST00000557703 OSBPL11Q9BXB4 747 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 NMUR2Q9GZQ4 415 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 ZDHHC11Q9H8X9 412 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 TPT1P8Q9HAU6 139 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 ACKR4Q9NPB9 350 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 ASF1BQ9NVP2 202 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 CALML5Q9NZT1 146 aa12.55□□□□□ -0.4
SHMT2-234ENST00000557703 FASNP49327 2511 aaKnown RBP12.55□□□□□ -0.4
SHMT2-234ENST00000557703 EXPH5Q8NEV8 1989 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 EVPLLA8MZ36 301 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 ALG1L2C9J202 215 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 NR5A2O00482 541 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 SUSD5O60279 629 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 SHOX2O60902 331 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-234ENST00000557703 ICOSLGO75144 302 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 MSX1P28360 303 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 EVI2BP34910 448 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 SEC24CP53992 1094 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 MLLT10P55197 1068 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 FOXK1P85037 733 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 PLGLB1Q02325 96 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 RBPJQ06330 500 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 C17orf67Q0P5P2 114 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 DCST2Q5T1A1 773 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 PRAMEF8Q5VWM4 474 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 PRAMEF7Q5VXH5 474 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 TIGD3Q6B0B8 471 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 PRR22Q8IZ63 422 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 GHDCQ8N2G8 530 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 FAM109AQ8N4B1 249 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 PCYOX1LQ8NBM8 494 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 OR4N2Q8NGD1 307 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 OR52N2Q8NGI0 321 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 OR5AK3PQ8NH89 298 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 RMND5BQ96G75 393 aaPredicted RBP12.54□□□□□ -0.4
SHMT2-234ENST00000557703 TRNT1Q96Q11 434 aaKnown RBP12.54□□□□□ -0.4
SHMT2-234ENST00000557703 INPP5KQ9BT40 448 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 HES7Q9BYE0 225 aa12.54□□□□□ -0.4
SHMT2-234ENST00000557703 PAIP1Q9H074 479 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms