RNA–Protein interactions for RNA: ENST00000557652.1

SUPT16H-208, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 5

Gene SUPT16H, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-208ENST00000557652 PSD4Q8NDX1 1056 aa12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 TMBIM1Q969X1 311 aa12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 C16orf58Q96GQ5 468 aa12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 TRNT1Q96Q11 434 aaKnown RBP12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 OR51I1Q9H343 314 aa12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 SLC25A37Q9NYZ2 338 aa12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 VAPAQ9P0L0 249 aa12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 P2RX2Q9UBL9 471 aa12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 TAGLN3Q9UI15 199 aa12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 PCDHGA10Q9Y5H3 936 aa12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 ZFYVE26Q68DK2 2539 aa12.99□□□□□ -0.33
SUPT16H-208ENST00000557652 SVILO95425 2214 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 IGSF10Q6WRI0 2623 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 HMGN4O00479 90 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 NME2P1O60361 137 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 DNAJA2O60884 412 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 SP1P08047 785 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 NME2P22392 152 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 MVDP53602 400 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 DSTNP60981 165 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 HPCAP84074 193 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 RBBP4Q09028 425 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 ZSWIM7Q19AV6 140 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 ZNF766Q5HY98 468 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 DCST2Q5T1A1 773 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 SLC30A6Q6NXT4 461 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 PCSK4Q6UW60 755 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 TRPM8Q7Z2W7 1104 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 SERPINA11Q86U17 422 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 MSRB3Q8IXL7 192 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 FITM2Q8N6M3 262 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 ZNF527Q8NB42 609 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 SPPL2AQ8TCT8 520 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 RNF138Q8WVD3 245 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 HGDQ93099 445 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 RMND5BQ96G75 393 aaPredicted RBP12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 CPPED1Q9BRF8 314 aaPredicted RBP12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 TMEM38AQ9H6F2 299 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 LIN28AQ9H9Z2 209 aaKnown RBP12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 ZBTB20Q9HC78 741 aaPredicted RBP12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 SLC6A13Q9NSD5 602 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 PRDM4Q9UKN5 801 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 CHCHD2Q9Y6H1 151 aaPredicted RBP12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 DNAJC13O75165 2243 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 ATMQ13315 3056 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 FREM3P0C091 2139 aa12.98□□□□□ -0.33
SUPT16H-208ENST00000557652 A0A1W2PQD3 144 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 FXYD1O00168 92 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 ZNF354AO60765 605 aaPredicted RBP12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 UNC5CO95185 931 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 PDGFAP04085 211 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 OR12D1P0DN82 309 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 CNR1P21554 472 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 CALB2P22676 271 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 CRATP43155 626 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 NNATQ16517 81 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 ZNF630Q2M218 657 aaPredicted RBP12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 SPATS1Q496A3 300 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 ZNF468Q5VIY5 522 aaPredicted RBP12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 SLC6A19Q695T7 634 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 TNFAIP8L2Q6P589 184 aaPredicted RBP12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 C16orf47Q6ZP98 133 aaPredicted RBP12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 LRRC74BQ6ZQY2 392 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 MISPQ8IVT2 679 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 FAM13CQ8NE31 585 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 XAGE5Q8WWM1 108 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 CDS1Q92903 461 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 RCN3Q96D15 328 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 ADOQ96SZ5 270 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 SDF2Q99470 211 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 ZNF350Q9GZX5 532 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 SAP130Q9H0E3 1048 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 SERHL2Q9H4I8 314 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 A4GALTQ9NPC4 353 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 SDHAF3Q9NRP4 125 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 UBQLN4Q9NRR5 601 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 PLA2G3Q9NZ20 509 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 SLAMF8Q9P0V8 285 aa12.97□□□□□ -0.33
SUPT16H-208ENST00000557652 HNRNPCL1O60812 293 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 UGT2B11O75310 529 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 TNFRSF21O75509 655 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 TBXA2RP21731 343 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 ELAVL4P26378 380 aaKnown RBP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 CRISP3P54108 245 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 GTDC1Q4AE62 458 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 SPINK14Q6IE38 97 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 NANOGP8Q6NSW7 305 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 ERICH5Q6P6B1 374 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 NET1Q7Z628 596 aaPredicted RBP12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 ZNF227Q86WZ6 799 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 POU5F2Q8N7G0 328 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 AMER2Q8N7J2 671 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 OR10G3Q8NGC4 313 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 OR4N2Q8NGD1 307 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 OR5D16Q8NGK9 328 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 PIK3R3Q92569 461 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 NTNG2Q96CW9 530 aa12.96□□□□□ -0.33
SUPT16H-208ENST00000557652 AURKBQ96GD4 344 aaPredicted RBP12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms