RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 PPM1AP35813 382 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 NFE2L1Q14494 772 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 PGGHGQ32M88 737 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 PLA1AQ53H76 456 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 EOGTQ5NDL2 527 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 CDC73Q6P1J9 531 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 SZRD1Q7Z422 152 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 CDH24Q86UP0 819 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 TPRA1Q86W33 373 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 C9orf62Q8N4C0 152 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 OR5K2Q8NHB8 316 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 CYB5D2Q8WUJ1 264 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 TFGQ92734 400 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-232ENST00000557487 UCN3Q969E3 161 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 GPR137Q96N19 417 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 BBS4Q96RK4 519 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 DHRS9Q9BPW9 319 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 PRR14Q9BWN1 585 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 HDHD2Q9H0R4 259 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 KCNK12Q9HB15 430 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 KLHL28Q9NXS3 571 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 CXXC1Q9P0U4 656 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-232ENST00000557487 TNFRSF10DQ9UBN6 386 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 CCL26Q9Y258 94 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 GPR52Q9Y2T5 361 aa15.27■□□□□ 0.04
SHMT2-232ENST00000557487 LOC102723532A0A0G2JNH3 316 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 TEX51A0A1B0GUA7 166 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 GTPBP1O00178 669 aaKnown RBP15.27■□□□□ 0.03
SHMT2-232ENST00000557487 ICMTO60725 284 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 APOL3O95236 402 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 LALBAP00709 142 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 C8AP07357 584 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 PEPDP12955 493 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 SOX18P35713 384 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 NCBP2P52298 156 aaKnown RBP eCLIP15.27■□□□□ 0.03
SHMT2-232ENST00000557487 GPR176Q14439 515 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 NDUFAF5Q5TEU4 345 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 SDE2Q6IQ49 451 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 RAB42Q8N4Z0 105 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 LMNTD1Q8N9Z9 388 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 OR5AR1Q8NGP9 310 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 PHOSPHO2Q8TCD6 241 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 SPRYD4Q8WW59 207 aaPredicted RBP15.27■□□□□ 0.03
SHMT2-232ENST00000557487 CITED4Q96RK1 184 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 WACQ9BTA9 647 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 DPH7Q9BTV6 452 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 MED28Q9H204 178 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 INPP5EQ9NRR6 644 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 C5AR2Q9P296 337 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 COPZ2Q9P299 210 aa15.27■□□□□ 0.03
SHMT2-232ENST00000557487 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.27■□□□□ 0.03
SHMT2-232ENST00000557487 A0A1W2PQ72 361 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 GSAPA4D1B5 854 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 LINC00862A6NCI5 91 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 RNF13O43567 381 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 ELK1P19419 428 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 PRKAR1BP31321 381 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 ACSL1P33121 698 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 ST8SIA6P61647 398 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 PRR5P85299 388 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 CSTF1Q05048 431 aaKnown RBP15.26■□□□□ 0.03
SHMT2-232ENST00000557487 FUT5Q11128 374 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 ARHGAP15Q53QZ3 475 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 ZNF311Q5JNZ3 666 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 LY6G5CQ5SRR4 150 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 ZBTB37Q5TC79 503 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 LILRA6Q6PI73 481 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 TMEM91Q6ZNR0 172 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 RFPL4BQ6ZWI9 263 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 UBE3DQ7Z6J8 389 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 C11orf96Q7Z7L8 435 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 GLCCI1Q86VQ1 547 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 ZFP41Q8N8Y5 198 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 OR4M1Q8NGD0 313 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 SECISBP2Q96T21 854 aaKnown RBP15.26■□□□□ 0.03
SHMT2-232ENST00000557487 ACAT2Q9BWD1 397 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 FN3KQ9H479 309 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 GALNT9Q9HCQ5 603 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 TDP1Q9NUW8 608 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 NLGN3Q9NZ94 848 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 PTGFRNQ9P2B2 879 aa15.26■□□□□ 0.03
SHMT2-232ENST00000557487 DNMT3AQ9Y6K1 912 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-232ENST00000557487 KPNA3O00505 521 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-232ENST00000557487 MAN2B1O00754 1011 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 KLF4O43474 513 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 AKR7A2O43488 359 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 NPR2P20594 1047 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 STOMP27105 288 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 TRIM23P36406 574 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 ATP6V1E1P36543 226 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 SSR2P43308 183 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 PITPNBP48739 271 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 CTBP2P56545 445 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 CD276Q5ZPR3 534 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 PYHIN1Q6K0P9 492 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 LYPD8Q6UX82 237 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 OAFQ86UD1 273 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 AMZ2Q86W34 360 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 TMIEQ8NEW7 156 aa15.25■□□□□ 0.03
SHMT2-232ENST00000557487 OR2T33Q8NG76 320 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms