RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 RPF2Q9H7B2 306 aaKnown RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ZMAT3Q9HA38 289 aaKnown RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 PLAC1Q9HBJ0 212 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 PPANQ9NQ55 473 aaKnown RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 KLHL28Q9NXS3 571 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 PRR13Q9NZ81 148 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 NDRG3Q9UGV2 375 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 TMEFF2Q9UIK5 374 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 PACSIN3Q9UKS6 424 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CORO1CQ9ULV4 474 aaPredicted RBP5.31□□□□□ -1.56
VPS33B-207ENST00000557470 ERVK-19Q9WJR5 959 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 OARD1Q9Y530 152 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 WIF1Q9Y5W5 379 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 PSAT1Q9Y617 370 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 IKBKGQ9Y6K9 419 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 SPACA6W5XKT8 324 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 USF3Q68DE3 2245 aa5.31□□□□□ -1.56
VPS33B-207ENST00000557470 CHD3Q12873 2000 aaKnown RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 A0A1W2PNV4 684 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 OR6C76A6NM76 312 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 WASHC1A8K0Z3 465 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 A8MXE2 369 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 H0Y3Z8 333 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 SAP18O00422 153 aaKnown RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 TAPBPO15533 448 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 OR10H2O60403 315 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 TNFSF13O75888 250 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 RCBTB2O95199 551 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 SNX4O95219 450 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 TTC4O95801 387 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 C8BP07358 591 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 CLEC2LP0C7M8 214 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 EPORP19235 508 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 FPR1P21462 350 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 PTPN6P29350 595 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 ADMP35318 185 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 MC3RP41968 323 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 CASP3P42574 277 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 SSR2P43308 183 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 MAGEA8P43361 318 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 MAP2K6P52564 334 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 GP2P55259 537 aaKnown RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 POU4F1Q01851 419 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 ID3Q02535 119 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 SRYQ05066 204 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 FAM27E3Q08E93 113 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 CAPRIN1Q14444 709 aaKnown RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 PDK4Q16654 411 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 AP5B1Q2VPB7 878 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 SPANXN3Q5MJ09 141 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 RNASEH2BQ5TBB1 312 aaKnown RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 C18orf63Q68DL7 685 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 TIGD3Q6B0B8 471 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 TRMT10BQ6PF06 316 aaKnown RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 BTN2A1Q7KYR7 527 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 ADAMTSL2Q86TH1 951 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 YRDCQ86U90 279 aaKnown RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 ST13P4Q8IZP2 240 aaPredicted RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 TAGAPQ8N103 731 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 SNX31Q8N9S9 440 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 SRFBP1Q8NEF9 429 aaKnown RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF473Q8WTR7 871 aaKnown RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 ANKRD7Q92527 254 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 RIT1Q92963 219 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 MAGOHBQ96A72 148 aaKnown RBP5.3□□□□□ -1.56
VPS33B-207ENST00000557470 ESAMQ96AP7 390 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 RGMAQ96B86 450 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 WDR34Q96EX3 536 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 VPS39Q96JC1 886 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 MARK4Q96L34 752 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 KRT12Q99456 494 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 MED18Q9BUE0 208 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 EFCAB11Q9BUY7 163 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 CAPS2Q9BXY5 557 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 MS4A8Q9BY19 250 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 PIGMQ9H3S5 423 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 DNAJC11Q9NVH1 559 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 GFOD1Q9NXC2 390 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 WWOXQ9NZC7 414 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 CLCF1Q9UBD9 225 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 CTNNAL1Q9UBT7 734 aa5.3□□□□□ -1.56
VPS33B-207ENST00000557470 RAI1Q7Z5J4 1906 aaPredicted RBP5.29□□□□□ -1.56
VPS33B-207ENST00000557470 C2orf92A0A1B0GVN3 265 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 FAM95CA0A1B0GW59 222 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 A0A1W2PPL8 197 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 A0A1W2PS29 197 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 GLOD5A6NK44 160 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CAPN14A8MX76 684 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF561-AS1K7EIQ3 104 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 STK16O75716 305 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 TGM6O95932 706 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 ACTL6AO96019 429 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 PCNAP12004 261 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CPN1P15169 458 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 PAX1P15863 534 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 KRT15P19012 456 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 CRYGSP22914 178 aa5.29□□□□□ -1.56
VPS33B-207ENST00000557470 PAX7P23759 505 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms