RNA–Protein interactions for RNA: ENST00000557336.1

HNRNPC-231, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), human

TSL 3

Gene HNRNPC, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HNRNPC-231	ENST00000557336	UBFD1	O14562	309 aa	Known RBP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	PCDH7	O60245	1069 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	SUPT7L	O94864	414 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	GOSR1	O95249	250 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	PSMG1	O95456	288 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	CGA	P01215	116 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	SNRPA	P09012	282 aa	Known RBP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	DRD2	P14416	443 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	IMPDH1	P20839	514 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	TCEA1	P23193	301 aa	Known RBP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	DPP4	P27487	766 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	LOX	P28300	417 aa	Predicted RBP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	CCKAR	P32238	428 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	KIR2DL2	P43627	348 aa	Predicted RBP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	SUCLG1	P53597	346 aa	Known RBP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	PNLIPRP2	P54317	469 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	FOXA1	P55317	472 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	BCL2A1	Q16548	175 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	VWA1	Q6PCB0	445 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	ZNF474	Q6S9Z5	364 aa	Predicted RBP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	SCIMP	Q6UWF3	145 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	GPRIN3	Q6ZVF9	776 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	LARP4	Q71RC2	724 aa	Known RBP eCLIP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	BTLA	Q7Z6A9	289 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	SLC44A2	Q8IWA5	706 aa	Predicted RBP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	OR2M3	Q8NG83	312 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	METTL6	Q8TCB7	284 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	SMPDL3B	Q92485	455 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	FIG4	Q92562	907 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	EXOSC8	Q96B26	276 aa	Known RBP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	EFHD2	Q96C19	240 aa	Predicted RBP	10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	TMCO6	Q96DC7	493 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	SFXN2	Q96NB2	322 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	WFIKKN1	Q96NZ8	548 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	NMRK1	Q9NWW6	199 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	SIRT5	Q9NXA8	310 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	PACSIN3	Q9UKS6	424 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	TIMM22	Q9Y584	194 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	COL6A5	A8TX70	2615 aa		10.08	□□□□□ -0.8
HNRNPC-231	ENST00000557336	FBN3	Q75N90	2809 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	SERTM1	A2A2V5	107 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	CTIF	O43310	598 aa	Known RBP	10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	ULK1	O75385	1050 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	BCAS2	O75934	225 aa	Predicted RBP	10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	KRT6A	P02538	564 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	KRT6B	P04259	564 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	TIA1	P31483	386 aa	Known RBP eCLIP	10.07	□□□□□ -0.8	2e-7	■■■■■ 28.7
HNRNPC-231	ENST00000557336	KRT6C	P48668	564 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	PCYT1A	P49585	367 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	PRKAA2	P54646	552 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	CKAP4	Q07065	602 aa	Known RBP	10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	GAB1	Q13480	694 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	EFR3A	Q14156	821 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	RASA2	Q15283	850 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	GUSBP1	Q15486	140 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	TEX35	Q5T0J7	233 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	AAGAB	Q6PD74	315 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	APOOL	Q6UXV4	268 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336		Q71RC1	249 aa	Predicted RBP	10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	CIART	Q8N365	385 aa	Predicted RBP	10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	GBP7	Q8N8V2	638 aa	Predicted RBP	10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	MZB1	Q8WU39	189 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	IFT81	Q8WYA0	676 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	MTBP	Q96DY7	904 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	ARSG	Q96EG1	525 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	C18orf12	Q96KH6	178 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	FMO2	Q99518	471 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	YIPF4	Q9BSR8	244 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	EBPL	Q9BY08	206 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	PIGM	Q9H3S5	423 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	DSN1	Q9H410	356 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	GSTO2	Q9H4Y5	243 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	TNFRSF12A	Q9NP84	129 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	C6orf203	Q9P0P8	240 aa	Predicted RBP	10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	EMCN	Q9ULC0	261 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	EDAR	Q9UNE0	448 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	ZNF337	Q9Y3M9	751 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	PRR14L	Q5THK1	2151 aa		10.07	□□□□□ -0.8
HNRNPC-231	ENST00000557336	GNG14	A0A1W2PPG7	69 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	UPK1A	O00322	258 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	MSTN	O14793	375 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	URI1	O94763	535 aa	Predicted RBP	10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	ESRRB	O95718	433 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	ATP5F1	P24539	256 aa	Predicted RBP	10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	DSCR4	P56555	118 aa	Predicted RBP	10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	CLDN20	P56880	219 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	NKX6-1	P78426	367 aa	Predicted RBP	10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	LTB	Q06643	244 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	TMEM44	Q2T9K0	475 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	FBXW10	Q5XX13	1052 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	FAM71E1	Q6IPT2	247 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	SH2D5	Q6ZV89	423 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	BIVM	Q86UB2	503 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	GRAMD2A	Q8IUY3	354 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	OR5M1	Q8NGP8	315 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	L3HYPDH	Q96EM0	354 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	PIGQ	Q9BRB3	760 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	OPN3	Q9H1Y3	402 aa	Predicted RBP	10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	GLIPR2	Q9H4G4	154 aa		10.06	□□□□□ -0.8
HNRNPC-231	ENST00000557336	RNF122	Q9H9V4	155 aa		10.06	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 73 ms