RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 NCBP2LA6PVI3 153 aaKnown RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 SOCS5O75159 536 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ADH7P40394 386 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 TEKQ02763 1124 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 PPP1R26Q5T8A7 1209 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 SIGLECL1Q8N7X8 197 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 FCRL1Q96LA6 429 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 FCRL3Q96P31 734 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF331Q9NQX6 463 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 A0A1W2PPH5 198 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 TRAF3IP2O43734 574 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ADAM11O75078 769 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 EPOP01588 193 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 GABRR2P28476 465 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 CPXM2Q8N436 756 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 DUSP9Q99956 384 aaKnown RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 KCNMB3Q9NPA1 279 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 POT1Q9NUX5 634 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 STEAP1Q9UHE8 339 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 CEP170BQ9Y4F5 1589 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 EDDM13A0A1B0GTR0 161 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 MT-CYBP00156 380 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 MMP7P09237 267 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 GGT1P19440 569 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 MYF6P23409 242 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 SULT1A2P50226 295 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 VITQ6UXI7 678 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ASB17Q8WXJ9 295 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 GTF2H4Q92759 462 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 KCNH6Q9H252 994 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 LAP3P28838 519 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 HOXD12P35452 270 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 FLI1Q01543 452 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 MCATQ8IVS2 390 aaKnown RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 KLHL42Q9P2K6 505 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 OR51F1A6NGY5 319 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 BUD23O43709 281 aaKnown RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 B3GALNT1O75752 331 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF791Q3KP31 576 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 RNF212Q495C1 297 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 PLEKHS1Q5SXH7 462 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ZNF783Q6ZMS7 281 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 BRIX1Q8TDN6 353 aaKnown RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 DCLRE1CQ96SD1 692 aaKnown RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 HINT2Q9BX68 163 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ABCC3O15438 1527 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 PIKFYVEQ9Y2I7 2098 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 DRD2P14416 443 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ARSBP15848 533 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 GRB2P62993 217 aaKnown RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 SLC6A19Q695T7 634 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 SLC46A3Q7Z3Q1 461 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 GPR137CQ8N3F9 429 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 OR6Q1Q8NGQ2 317 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 GINS3Q9BRX5 216 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 GVINP1Q7Z2Y8 2422 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 HBQ1P09105 142 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ADGRG3Q86Y34 549 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 TFGQ92734 400 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 CLSTN3Q9BQT9 956 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 C12orf10Q9HB07 376 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 SRPX2O60687 465 aaPredicted RBP8.42□□□□□ -1.06
SYNE3-205ENST00000557275 TRAPPC2P0DI81 140 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 TRAPPC2BP0DI82 140 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 RFWD3Q6PCD5 774 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 GPR148Q8TDV2 347 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ZNRF4Q8WWF5 429 aa8.42□□□□□ -1.06
SYNE3-205ENST00000557275 ARHGAP33O14559 1287 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 MAP2K5Q13163 448 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 LRRC55Q6ZSA7 311 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ANKRD9Q96BM1 317 aaPredicted RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 RBCK1Q9BYM8 510 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 PCDHB10Q9UN67 800 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 CSTAP01040 98 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 PYCR1P32322 319 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 WRAP53Q9BUR4 548 aaKnown RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 OR10A5Q9H207 317 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 OR10A2Q9H208 303 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 PLSCR5A0PG75 271 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SYT7O43581 403 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 CSN1S1P47710 185 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 DUSP3P51452 185 aaPredicted RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 LEG1Q6P5S2 330 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 BTNL8Q6UX41 500 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 CERKQ8TCT0 537 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 YDJCA8MPS7 323 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ADH1BP00325 375 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ORM1P02763 201 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 SHMT2P34897 504 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 GIPRP48546 466 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 OR10K2Q6IF99 312 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 MFSD6LQ8IWD5 586 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 CCDC74AQ96AQ1 378 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 LSM5Q9Y4Y9 91 aaKnown RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 CHD3Q12873 2000 aaKnown RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 A0A1W2PQL4 384 aaPredicted RBP8.41□□□□□ -1.06
SYNE3-205ENST00000557275 B4DXG7 233 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 TACR2P21452 398 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 EFNA3P52797 238 aa8.41□□□□□ -1.06
SYNE3-205ENST00000557275 ACSM3Q53FZ2 586 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms