RNA–Protein interactions for RNA: ENST00000556907.1

PCNX4-213, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-213ENST00000556907 ZBTB20Q9HC78 741 aaPredicted RBP15.16■□□□□ 0.02
PCNX4-213ENST00000556907 THUMPD1Q9NXG2 353 aaKnown RBP15.16■□□□□ 0.02
PCNX4-213ENST00000556907 ACTR3BQ9P1U1 418 aa15.16■□□□□ 0.02
PCNX4-213ENST00000556907 ANAPC2Q9UJX6 822 aa15.16■□□□□ 0.02
PCNX4-213ENST00000556907 USP22Q9UPT9 525 aa15.16■□□□□ 0.02
PCNX4-213ENST00000556907 B3GNT3Q9Y2A9 372 aa15.16■□□□□ 0.02
PCNX4-213ENST00000556907 FAM208BQ5VWN6 2430 aa15.16■□□□□ 0.02
PCNX4-213ENST00000556907 K7EM74 188 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 WWP2O00308 870 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 TO15178 435 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 ASNA1O43681 348 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 OR2J2O76002 312 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 ETFAP13804 333 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 PCGF2P35227 344 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 CD96P40200 585 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 CRATP43155 626 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 PRIM2P49643 509 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 TMED10P49755 219 aaKnown RBP15.15■□□□□ 0.02
PCNX4-213ENST00000556907 TNFSF10P50591 281 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 ACTR3P61158 418 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 MS4A2Q01362 244 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 RBBP4Q09028 425 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 TUBA3CQ13748 450 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 FLOT2Q14254 428 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 KPNB1Q14974 876 aaKnown RBP15.15■□□□□ 0.02
PCNX4-213ENST00000556907 EXOSC6Q5RKV6 272 aaKnown RBP15.15■□□□□ 0.02
PCNX4-213ENST00000556907 MFSD12Q6NUT3 480 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 TUBA3EQ6PEY2 450 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 AMER2Q8N7J2 671 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 RBMXL3Q8N7X1 1067 aaKnown RBP15.15■□□□□ 0.02
PCNX4-213ENST00000556907 HOXB13Q92826 284 aaPredicted RBP15.15■□□□□ 0.02
PCNX4-213ENST00000556907 VSTM2LQ96N03 204 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 BTBD9Q96Q07 612 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 GAL3ST4Q96RP7 486 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 TRIM15Q9C019 465 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.15■□□□□ 0.02
PCNX4-213ENST00000556907 LRFN1Q9P244 771 aa15.15■□□□□ 0.02
PCNX4-213ENST00000556907 TNRC6AQ8NDV7 1962 aaKnown RBP15.15■□□□□ 0.02
PCNX4-213ENST00000556907 IGSF10Q6WRI0 2623 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 FRG2CA6NGY1 282 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 EIF4E1BA6NMX2 242 aaKnown RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 A8MVJ9 347 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 STAMBPO95630 424 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 HMGN2P05204 90 aaKnown RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 CD46P15529 392 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 ATP6V1B2P21281 511 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 NR0B1P51843 470 aaKnown RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 RPS26P62854 115 aaKnown RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 OC90Q02509 493 aaPredicted RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 DUSP8Q13202 625 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 LASP1Q14847 261 aaKnown RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 ADRM1Q16186 407 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 ZNF630Q2M218 657 aaPredicted RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 VMACQ2NL98 169 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 MTX3Q5HYI7 312 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 RPUSD3Q6P087 351 aaKnown RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 CDC73Q6P1J9 531 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 TNFAIP8L2Q6P589 184 aaPredicted RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 SLC30A8Q8IWU4 369 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 CDRT4Q8N9R6 151 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 GOLM1Q8NBJ4 401 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 C11orf65Q8NCR3 313 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 MAGED4Q96JG8 741 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 ACTRT3Q9BYD9 372 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 PCDHAC1Q9H158 963 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 OR51I1Q9H343 314 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 PIF1Q9H611 641 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 FOLH1BQ9HBA9 442 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 A4GALTQ9NPC4 353 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 HPF1Q9NWY4 346 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 GIN1Q9NXP7 522 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 PLA2G3Q9NZ20 509 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 EGFL7Q9UHF1 273 aa15.14■□□□□ 0.01
PCNX4-213ENST00000556907 GPR55Q9Y2T6 319 aaPredicted RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 TLN1Q9Y490 2541 aaKnown RBP15.14■□□□□ 0.01
PCNX4-213ENST00000556907 MAN1A2O60476 641 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 NUDT7P0C024 238 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 FBXO45P0C2W1 286 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 MATN1P21941 496 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 MSX2P35548 267 aaPredicted RBP15.13■□□□□ 0.01
PCNX4-213ENST00000556907 MAN2A2P49641 1150 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 CCNIQ14094 377 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 VEZF1Q14119 521 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 ZNF169Q14929 603 aaPredicted RBP15.13■□□□□ 0.01
PCNX4-213ENST00000556907 OR1C1Q15619 314 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 INAQ16352 499 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 DHFR2Q86XF0 187 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 CYP4Z2PQ8N1L4 340 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 TMEM178AQ8NBL3 297 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 MDS2Q8NDY4 140 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 BHLHE22Q8NFJ8 381 aaPredicted RBP15.13■□□□□ 0.01
PCNX4-213ENST00000556907 OR52E4Q8NGH9 312 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 SECISBP2Q96T21 854 aaKnown RBP15.13■□□□□ 0.01
PCNX4-213ENST00000556907 LMF2Q9BU23 707 aaKnown RBP15.13■□□□□ 0.01
PCNX4-213ENST00000556907 ITPAQ9BY32 194 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 ANKRA2Q9H9E1 313 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 MRTO4Q9UKD2 239 aaKnown RBP15.13■□□□□ 0.01
PCNX4-213ENST00000556907 FAF1Q9UNN5 650 aaPredicted RBP15.13■□□□□ 0.01
PCNX4-213ENST00000556907 NPFFR2Q9Y5X5 522 aa15.13■□□□□ 0.01
PCNX4-213ENST00000556907 AQP12BA6NM10 295 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms