RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	WBP1	Q96G27	269 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	FAM210B	Q96KR6	192 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	GAL3ST4	Q96RP7	486 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	PRRT1	Q99946	306 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZNF559	Q9BR84	538 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	C11orf70	Q9BRQ4	267 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	TUBGCP2	Q9BSJ2	902 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	TUBB6	Q9BUF5	446 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	GATA5	Q9BWX5	397 aa	Predicted RBP	4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	GTPBP2	Q9BX10	602 aa	Known RBP	4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	PKIB	Q9C010	78 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	CCDC90B	Q9GZT6	254 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SLC5A7	Q9GZV3	580 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ASB7	Q9H672	318 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	KAT8	Q9H7Z6	458 aa	Known RBP	4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	METTL7A	Q9H8H3	244 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SFXN1	Q9H9B4	322 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZNF556	Q9HAH1	456 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839		Q9N2J8	555 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	TXNRD2	Q9NNW7	524 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ABCB8	Q9NUT2	735 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZNF701	Q9NV72	531 aa	Predicted RBP	4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	TAB2	Q9NYJ8	693 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	CNOT8	Q9UFF9	292 aa	Known RBP	4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	HAO1	Q9UJM8	370 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	GUCA1B	Q9UMX6	200 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	A4GNT	Q9UNA3	340 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	LRRC7	Q96NW7	1537 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	DIP2C	Q9Y2E4	1556 aa		4.92	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	TRIM49B	A6NDI0	452 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	LEUTX	A8MZ59	168 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SUPT3H	B4E1H0	165 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZNF814	B7Z6K7	855 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	CDC7	O00311	574 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	PHYH	O14832	338 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SCAMP2	O15127	329 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SURF4	O15260	269 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ABCC4	O15439	1325 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SCN2B	O60939	215 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	NPHP4	O75161	1426 aa	Predicted RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SNAI1	O95863	264 aa	Predicted RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	TGFA	P01135	160 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	PPBP	P02775	128 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	MMP2	P08253	660 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SUPT20HL2	P0C7V6	817 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SLC35E2B	P0CK96	405 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SLC35E2	P0CK97	266 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	NR2C1	P13056	603 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	CCL2	P13500	99 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZNF26	P17031	533 aa	Predicted RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	CALML3	P27482	149 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	FDFT1	P37268	417 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	NAA10	P41227	235 aa	Predicted RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	RGS6	P49758	472 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	RBX1	P62877	108 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	HSF2	Q03933	536 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	DMWD	Q09019	674 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SCGB2A2	Q13296	93 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	PPIG	Q13427	754 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	KRR1	Q13601	381 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	PSME4	Q14997	1843 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	RNPS1	Q15287	305 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	RPS6KA1	Q15418	735 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	NDUFAF6	Q330K2	333 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	DPCR1	Q3MIW9	517 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	RNF212	Q495C1	297 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	BEX5	Q5H9J7	111 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	RABGAP1L	Q5R372	815 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	DNLZ	Q5SXM8	178 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ATG9B	Q674R7	924 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	LRRC66	Q68CR7	880 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	KRT39	Q6A163	491 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	CFAP77	Q6ZQR2	320 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	LRRC74B	Q6ZQY2	392 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZBTB49	Q6ZSB9	765 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	LRRC70	Q7Z2Q7	622 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	NRK	Q7Z2Y5	1582 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	CUZD1	Q86UP6	607 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SATL1	Q86VE3	508 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZNF410	Q86VK4	478 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SELENOH	Q8IZQ5	122 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	KDM8	Q8N371	416 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	CCDC185	Q8N715	623 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	OR7G3	Q8NG95	312 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SETD6	Q8TBK2	473 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	ZNF596	Q8TC21	504 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	GRHL3	Q8TE85	626 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	PPP4R1	Q8TF05	950 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	DUSP19	Q8WTR2	217 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	GDPD5	Q8WTR4	605 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	FAM172A	Q8WUF8	416 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	KCNE4	Q8WWG9	221 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	STMN2	Q93045	179 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	SLAMF9	Q96A28	289 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	DCPS	Q96C86	337 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	AP2M1	Q96CW1	435 aa		4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	PABPC5	Q96DU9	382 aa	Known RBP	4.91	□□□□□ -1.62
RALGAPA1-215	ENST00000556839	BSCL2	Q96G97	398 aa	Predicted RBP	4.91	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms