RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 ARRB1P49407 418 aaPredicted RBP17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 PGDP52209 483 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 SKP1P63208 163 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 INAVAQ3KP66 663 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 ZNF836Q6ZNA1 936 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 P3H2Q8IVL5 708 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 GALNT12Q8IXK2 581 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 PEX5LQ8IYB4 626 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 ZNF675Q8TD23 568 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 ISOC1Q96CN7 298 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 ARHGDIGQ99819 225 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 FUZQ9BT04 418 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 ZNF226Q9NYT6 803 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 DHCR7Q9UBM7 475 aaKnown RBP17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 ITGB1BP2Q9UKP3 347 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 MRPS33Q9Y291 106 aaKnown RBP17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 TPRKBQ9Y3C4 175 aa17.05■□□□□ 0.32
SDR39U1-220ENST00000556548 A0A1W2PRQ8 180 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 ARRDC5A6NEK1 342 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 H3BN98 237 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 DUX1O43812 170 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 CTNSO60931 367 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 CCNYL3P0C7X3 344 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 CDK4P11802 303 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 CD1CP29017 333 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 PRKAR1BP31321 381 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 PSMD7P51665 324 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 CRISP1P54107 249 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 UGT2B15P54855 530 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 RGS8P57771 180 aaPredicted RBP17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 SMIM11AP58511 58 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 DGCR6Q14129 220 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 ZNF267Q14586 743 aaPredicted RBP17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 TCTE1Q5JU00 501 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 AHSA2Q719I0 299 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 ZAR1Q86SH2 424 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 SEMA4GQ9NTN9 838 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 IMPAD1Q9NX62 359 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 REV1Q9UBZ9 1251 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 TP53BP1Q12888 1972 aaPredicted RBP17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 ADAP00813 363 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 S1PR1P21453 382 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 SLC35A2P78381 396 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 CCDC81Q6ZN84 652 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 PARP8Q8N3A8 854 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 OR4N2Q8NGD1 307 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 OR4K5Q8NGD3 323 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 OR6C4Q8NGE1 309 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 GAB3Q8WWW8 586 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 GPA33Q99795 319 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 NUDT22Q9BRQ3 303 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 CNPPD1Q9BV87 410 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 RAB33BQ9H082 229 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 CACYBPQ9HB71 228 aaKnown RBP17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 KLHL28Q9NXS3 571 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 FTSJ1Q9UET6 329 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 KCNE5Q9UJ90 142 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 MGAT4BQ9UQ53 548 aa17.04■□□□□ 0.32
SDR39U1-220ENST00000556548 SYT5O00445 386 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 CLDN4O14493 209 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 STX11O75558 287 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 INMTO95050 263 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 IFNA16P05015 189 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 FOLR1P15328 257 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 GNSP15586 552 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 CNR2P34972 360 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 EMP3P54852 163 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 HSD11B2P80365 405 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 ZXDAP98168 799 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 EMX1Q04741 257 aaPredicted RBP17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 GRM7Q14831 915 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 NNATQ16517 81 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 ENTPD8Q5MY95 495 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 ZER1Q7Z7L7 766 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 PLXDC1Q8IUK5 500 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 ZNF595Q8IYB9 648 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 ALDH16A1Q8IZ83 802 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 RHOXF1Q8NHV9 184 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 PIGKQ92643 395 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 DGAT2Q96PD7 388 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 ZNF350Q9GZX5 532 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 POLR2J3Q9H1A7 115 aaKnown RBP17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 ERVMER34-1Q9H9K5 563 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 DUSP22Q9NRW4 184 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 CUTCQ9NTM9 273 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 DTX4Q9Y2E6 619 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 UNC13CQ8NB66 2214 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 OXSR1O95747 527 aaPredicted RBP17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 GKN3PP0CG01 181 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 TNNI3P19429 210 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 PCMT1P22061 227 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 MMP11P24347 488 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 LARS2Q15031 903 aaKnown RBP17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 GARNL3Q5VVW2 1013 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 DHRS4L2Q6PKH6 230 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 MORN4Q8NDC4 146 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 OR13F1Q8NGS4 319 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 CCDC74AQ96AQ1 378 aa17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 C12orf43Q96C57 262 aaKnown RBP17.03■□□□□ 0.32
SDR39U1-220ENST00000556548 NECAB3Q96P71 396 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms