RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 XIAPP98170 497 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 DLG1Q12959 904 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 NFATC2Q13469 925 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 PEX6Q13608 980 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ARHGAP19Q14CB8 494 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 PDGFRLQ15198 375 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 DUSP6Q16828 381 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 COL28A1Q2UY09 1125 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 TRMT5Q32P41 509 aaKnown RBP4.8□□□□□ -1.64
SRP54-211ENST00000556445 GXYLT1Q4G148 440 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 KLHL26Q53HC5 615 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 CDKL4Q5MAI5 379 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ZNF678Q5SXM1 525 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 TMEM198Q66K66 360 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 DHRS7BQ6IAN0 325 aaPredicted RBP4.8□□□□□ -1.64
SRP54-211ENST00000556445 WBP2NLQ6ICG8 309 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 SULT1C3Q6IMI6 304 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 GRHL2Q6ISB3 625 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ACSM6Q6P461 480 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ZNF549Q6P9A3 640 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 GDPD4Q6W3E5 623 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ISCA2Q86U28 154 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 SPATA24Q86W54 205 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 LONP2Q86WA8 852 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 TMEM25Q86YD3 366 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 MFSD6LQ8IWD5 586 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 SFTPA1Q8IWL2 248 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 CPSF7Q8N684 471 aaKnown RBP4.8□□□□□ -1.64
SRP54-211ENST00000556445 ZNF781Q8N8C0 355 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ACVR1CQ8NER5 493 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 VN1R2Q8NFZ6 395 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 OR2T3Q8NH03 318 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 AKR7LQ8NHP1 331 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 C17orf50Q8WW18 174 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 TCEAL4Q96EI5 215 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 WDYHV1Q96HA8 205 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 PPP1R16AQ96I34 528 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ANKRD27Q96NW4 1050 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 MCCC1Q96RQ3 725 aaPredicted RBP4.8□□□□□ -1.64
SRP54-211ENST00000556445 ATOH8Q96SQ7 321 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 SERPINI1Q99574 410 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 GPR21Q99679 349 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ASCL2Q99929 193 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 TBC1D10AQ9BXI6 508 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 NUSAP1Q9BXS6 441 aaKnown RBP4.8□□□□□ -1.64
SRP54-211ENST00000556445 SLCO5A1Q9H2Y9 848 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ZDHHC6Q9H6R6 413 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ALG9Q9H6U8 611 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ASB8Q9H765 288 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 MEAF6Q9HAF1 191 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 LMAN1LQ9HAT1 526 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 DUS2Q9NX74 493 aaKnown RBP4.8□□□□□ -1.64
SRP54-211ENST00000556445 QPCTLQ9NXS2 382 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 GTSE1Q9NYZ3 720 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 NUDT4Q9NZJ9 180 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 CDC14AQ9UNH5 594 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 PLA2G4CQ9UP65 541 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 ERVW-1Q9UQF0 538 aa4.8□□□□□ -1.64
SRP54-211ENST00000556445 MRPS7Q9Y2R9 242 aaKnown RBP4.8□□□□□ -1.64
SRP54-211ENST00000556445 ZNF106Q9H2Y7 1883 aaKnown RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 ACOD1A6NK06 481 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 K7ERQ8 282 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 TLR4O00206 839 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 NDUFS8O00217 210 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 PSMD9O00233 223 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CCL22O00626 93 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 ZNF195O14628 629 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 SPRY2O43597 315 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 KLK8O60259 260 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CRCPO75575 148 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 TM7SF2O76062 418 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 AP2A2O94973 939 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CLDN7O95471 211 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 ATP6V1G2O95670 118 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CA3P07451 260 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CHRNGP07510 517 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 KRT16P08779 473 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CHRM5P08912 532 aaPredicted RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 COX4I1P13073 169 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 IL7RP16871 459 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CEBPBP17676 345 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 DNASE1P24855 282 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 PTBP1P26599 531 aaKnown RBP eCLIP4.79□□□□□ -1.64
SRP54-211ENST00000556445 ACADLP28330 430 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 HNRNPH1P31943 449 aaKnown RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 ATP4BP51164 291 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 RAP1GDS1P52306 607 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 ACTR3P61158 418 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 KCNJ2P63252 427 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 GRIK2Q13002 908 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 LCP2Q13094 533 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 STX5Q13190 355 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 TSTA3Q13630 321 aaPredicted RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 PDE7AQ13946 482 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CYLC2Q14093 348 aaPredicted RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 RCN1Q15293 331 aa4.79□□□□□ -1.64
SRP54-211ENST00000556445 CLPPQ16740 277 aaPredicted RBP4.79□□□□□ -1.64
SRP54-211ENST00000556445 IQCCQ4KMZ1 466 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms