RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 GAS1P54826 345 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 GTF2H2Q13888 395 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 PFKFB4Q16877 469 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 ZNF672Q499Z4 452 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-219ENST00000556432 LGSNQ5TDP6 509 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 GTF2H2CQ6P1K8 395 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 CLEC2AQ6UVW9 174 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 ISCA2Q86U28 154 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 SLC44A2Q8IWA5 706 aaPredicted RBP12.46□□□□□ -0.41
ACTN1-219ENST00000556432 ZBED8Q8IZ13 594 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 FADS6Q8N9I5 356 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 STEAP2Q8NFT2 490 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 KBTBD8Q8NFY9 601 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 ATP6V1E2Q96A05 226 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 ATOH8Q96SQ7 321 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 RBBP8Q99708 897 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 CPNE1Q99829 537 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 IPPKQ9H8X2 491 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 ANKRA2Q9H9E1 313 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 SDHAF3Q9NRP4 125 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 STOML1Q9UBI4 398 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 ADAM29Q9UKF5 820 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 MCTS1Q9ULC4 181 aaKnown RBP12.46□□□□□ -0.41
ACTN1-219ENST00000556432 SNX8Q9Y5X2 465 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 AP4B1Q9Y6B7 739 aa12.46□□□□□ -0.41
ACTN1-219ENST00000556432 ANK2Q01484 3957 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 CXorf49A8MYA2 514 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-219ENST00000556432 SS18L1O75177 396 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-219ENST00000556432 SYNGR4O95473 234 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 LTA4HP09960 611 aaKnown RBP12.45□□□□□ -0.42
ACTN1-219ENST00000556432 CT45A8P0DMV1 189 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 CT45A9P0DMV2 189 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 PSMB1P20618 241 aaKnown RBP12.45□□□□□ -0.42
ACTN1-219ENST00000556432 DUSP2Q05923 314 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 DLG1Q12959 904 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 ZKSCAN8Q15776 578 aaPredicted RBP12.45□□□□□ -0.42
ACTN1-219ENST00000556432 CT45A2Q5DJT8 189 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 SGO1Q5FBB7 561 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 SH2D4BQ5SQS7 431 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 NCMAPQ5T1S8 102 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 DNM1P46Q6ZS02 220 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 GOLGA7Q7Z5G4 137 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 CMC1Q7Z7K0 106 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 CEP112Q8N8E3 955 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 OR52B6Q8NGF0 335 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 WDR20Q8TBZ3 569 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 ACTRT1Q8TDG2 376 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 CDK15Q96Q40 435 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 TNFRSF13CQ96RJ3 184 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 TRIM31Q9BZY9 425 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 OR10A4Q9H209 315 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 ZBTB26Q9HCK0 441 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 FAIMQ9NVQ4 179 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 CES1P1Q9UKY3 287 aa12.45□□□□□ -0.42
ACTN1-219ENST00000556432 SHISA8B8ZZ34 492 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 BCAS2O75934 225 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-219ENST00000556432 CLDN9O95484 217 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 ESRRBO95718 433 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 ZNF16P17020 682 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-219ENST00000556432 GP5P40197 560 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 PNLIPRP2P54317 469 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 PSPHP78330 225 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 BSPH1Q075Z2 132 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 ZNF155Q12901 538 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-219ENST00000556432 IFT88Q13099 833 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 TSC22D1Q15714 1073 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 NRF1Q16656 503 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 PGGHGQ32M88 737 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 FIGNL1Q6PIW4 674 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 NPSR1Q6W5P4 371 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 COMMD6Q7Z4G1 85 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 CTAGE3PQ8IX95 158 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 L3MBTL4Q8NA19 623 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 UHMK1Q8TAS1 419 aaKnown RBP12.44□□□□□ -0.42
ACTN1-219ENST00000556432 KAT2AQ92830 837 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 C1GALT1C1Q96EU7 318 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 ADAD1Q96M93 576 aaKnown RBP12.44□□□□□ -0.42
ACTN1-219ENST00000556432 OSBPL9Q96SU4 736 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 TRAF4Q9BUZ4 470 aaPredicted RBP12.44□□□□□ -0.42
ACTN1-219ENST00000556432 FAIM2Q9BWQ8 316 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 TMEM160Q9NX00 188 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 SENP1Q9P0U3 644 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 XPR1Q9UBH6 696 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 SLC12A4Q9UP95 1085 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 ALPK2Q86TB3 2170 aa12.44□□□□□ -0.42
ACTN1-219ENST00000556432 PYGBP11216 843 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 PTNP21246 168 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 SPRP35270 261 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-219ENST00000556432 RFX3P48380 749 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 CLK3P49761 638 aaKnown RBP12.43□□□□□ -0.42
ACTN1-219ENST00000556432 ALDH18A1P54886 795 aaKnown RBP12.43□□□□□ -0.42
ACTN1-219ENST00000556432 DSCR9P59020 149 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 VLDLRP98155 873 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 TAB1Q15750 504 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 FRG2Q64ET8 278 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 CYB5R2Q6BCY4 276 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 IL17RELQ6ZVW7 336 aa12.43□□□□□ -0.42
ACTN1-219ENST00000556432 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
ACTN1-219ENST00000556432 ATG4DQ86TL0 474 aaPredicted RBP12.43□□□□□ -0.42
ACTN1-219ENST00000556432 GGNQ86UU5 652 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms