RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 OR4N2Q8NGD1 307 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 CEP70Q8NHQ1 597 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 NEIL3Q8TAT5 605 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 ARL8AQ96BM9 186 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 SARAFQ96BY9 339 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 EFHD2Q96C19 240 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-205ENST00000556310 PRPF18Q99633 342 aaKnown RBP10.54□□□□□ -0.72
SLIRP-205ENST00000556310 NUF2Q9BZD4 464 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 SLC6A15Q9H2J7 730 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 EXO5Q9H790 373 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 ZFAND3Q9H8U3 227 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 MEAF6Q9HAF1 191 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 C3orf14Q9HBI5 128 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 GALNT9Q9HCQ5 603 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 NEUROD4Q9HD90 331 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 EQTNQ9NQ60 294 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 SIRT3Q9NTG7 399 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-205ENST00000556310 PNPOQ9NVS9 261 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 THAP1Q9NVV9 213 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 SPRR3Q9UBC9 169 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 CBLCQ9ULV8 474 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 WIF1Q9Y5W5 379 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 NUP214P35658 2090 aaPredicted RBP10.54□□□□□ -0.72
SLIRP-205ENST00000556310 ARHGAP21Q5T5U3 1957 aa10.54□□□□□ -0.72
SLIRP-205ENST00000556310 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 A0A1W2PRB8 838 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 GNB5O14775 395 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 EMC8O43402 210 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 NKX2-2O95096 273 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 HPNP05981 417 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 H2AFXP16104 143 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-205ENST00000556310 LBPP18428 481 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 EFNA1P20827 205 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-205ENST00000556310 PTPN6P29350 595 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 MAP3K8P41279 467 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 PSMD4P55036 377 aaKnown RBP10.53□□□□□ -0.72
SLIRP-205ENST00000556310 DIO3P55073 304 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 CLDN8P56748 225 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 PRR5P85299 388 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 OCRLQ01968 901 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 GAB1Q13480 694 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 ART3Q13508 389 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 DECR1Q16698 335 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 EMC4Q5J8M3 183 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 OGFOD2Q6N063 350 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 MFSD12Q6NUT3 480 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 XKRXQ6PP77 449 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 WDR53Q7Z5U6 358 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-205ENST00000556310 NUP43Q8NFH3 380 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 OR1J4Q8NGS1 313 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 PSMA8Q8TAA3 256 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 OR5P2Q8WZ92 322 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 COQ8BQ96D53 544 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 FAM120BQ96EK7 910 aaKnown RBP10.53□□□□□ -0.72
SLIRP-205ENST00000556310 DTNBP1Q96EV8 351 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 GIMAP5Q96F15 307 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 ATP6V1G3Q96LB4 118 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 GNRHR2Q96P88 292 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 BHLHE41Q9C0J9 482 aaPredicted RBP10.53□□□□□ -0.72
SLIRP-205ENST00000556310 PNPLA3Q9NST1 481 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 MRTO4Q9UKD2 239 aaKnown RBP10.53□□□□□ -0.72
SLIRP-205ENST00000556310 ABCG2Q9UNQ0 655 aa10.53□□□□□ -0.72
SLIRP-205ENST00000556310 SLCO1B7G3V0H7 640 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 SDHDO14521 159 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 KLF11O14901 512 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 HDAC3O15379 428 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 LILRA1O75019 489 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 WDR1O75083 606 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 TRAPPC6AO75865 159 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 KCNH1O95259 989 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 IL33O95760 270 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 CYP4B1P13584 511 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 ACVR2AP27037 513 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 EVI2BP34910 448 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 TRPC1P48995 793 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 PRKAG1P54619 331 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 LSM12Q3MHD2 195 aaKnown RBP10.52□□□□□ -0.73
SLIRP-205ENST00000556310 GXYLT1Q4G148 440 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 EXOSC6Q5RKV6 272 aaKnown RBP10.52□□□□□ -0.73
SLIRP-205ENST00000556310 WLSQ5T9L3 541 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 TMEM211Q6ICI0 200 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 ZCCHC12Q6PEW1 402 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 NCCRP1Q6ZVX7 275 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-205ENST00000556310 HDXQ7Z353 690 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 PLCZ1Q86YW0 608 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 MARVELD2Q8N4S9 558 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 OR5M9Q8NGP3 310 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 SFXN5Q8TD22 340 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 RMND5BQ96G75 393 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-205ENST00000556310 SH3GL2Q99962 352 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 DUSP26Q9BV47 211 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 MANSC1Q9H8J5 431 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 VIPAS39Q9H9C1 493 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 SERHLQ9NQF3 203 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 ZCCHC3Q9NUD5 404 aaKnown RBP10.52□□□□□ -0.73
SLIRP-205ENST00000556310 FAM120CQ9NX05 1096 aaKnown RBP10.52□□□□□ -0.73
SLIRP-205ENST00000556310 TNFRSF10DQ9UBN6 386 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 MARCOQ9UEW3 520 aaPredicted RBP10.52□□□□□ -0.73
SLIRP-205ENST00000556310 ACAD8Q9UKU7 415 aa10.52□□□□□ -0.73
SLIRP-205ENST00000556310 PCDHGB3Q9Y5G1 929 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms