RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 CBLCQ9ULV8 474 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 WDR45Q9Y484 360 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 GPC6Q9Y625 555 aaPredicted RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 TRBV11-1A0A0K0K1C0 115 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 SYNDIG1LA6NDD5 238 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 STX11O75558 287 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 CYC1P08574 325 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 TRHRP34981 398 aaPredicted RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 PIGAP37287 484 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 PPICP45877 212 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 OR1E2P47887 323 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 CHRNB3Q05901 458 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 IL10RAQ13651 578 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 GNA13Q14344 377 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 SSPNQ14714 243 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 BTBD16Q32M84 506 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 FAM98BQ52LJ0 330 aaKnown RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 HLA-DQA1Q5Y7H0 255 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 DESI1Q6ICB0 168 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 ZFP1Q6P2D0 407 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 HSDL2Q6YN16 418 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 SLC29A4Q7RTT9 530 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 AMIGO2Q86SJ2 522 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 COMTD1Q86VU5 262 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 VRK2Q86Y07 508 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 ARMC8Q8IUR7 673 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 BCORP1Q8N888 145 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 GPR32P1Q8NGA4 272 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 BBS10Q8TAM1 723 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 EFHD2Q96C19 240 aaPredicted RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 LCORQ96JN0 433 aaPredicted RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 BTBD9Q96Q07 612 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 WFDC6Q9BQY6 131 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 DOHHQ9BU89 302 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 GPR87Q9BY21 358 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 SEMA4CQ9C0C4 833 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 ZNF350Q9GZX5 532 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 SEMA6AQ9H2E6 1030 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 STX18Q9P2W9 335 aaKnown RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 SEC14L3Q9UDX4 400 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 KCNE5Q9UJ90 142 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 KLK13Q9UKR3 277 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 PPIEQ9UNP9 301 aaKnown RBP9.44□□□□□ -0.9
SRP54-208ENST00000555557 CFL2Q9Y281 166 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 SH3GLB1Q9Y371 365 aa9.44□□□□□ -0.9
SRP54-208ENST00000555557 DSPPQ9NZW4 1301 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 TRABD2BA6NFA1 517 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 PRAMEF25A6NGN4 478 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 CLDN24A6NM45 220 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 C21orf140B9A014 251 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 hCG_2039718K7EN88 272 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 PEX12O00623 359 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 SERPINB7O75635 380 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 PDE9AO76083 593 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 IFNA14P01570 189 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 RAP2AP10114 183 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 ETS2P15036 469 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 CD247P20963 164 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 ST13P50502 369 aaKnown RBP9.43□□□□□ -0.9
SRP54-208ENST00000555557 KCNJ10P78508 379 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 SRSF6Q13247 344 aaKnown RBP9.43□□□□□ -0.9
SRP54-208ENST00000555557 MAPK14Q16539 360 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 KRT73Q86Y46 540 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 GOLM1Q8NBJ4 401 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 SPPL2AQ8TCT8 520 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 TMBIM1Q969X1 311 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 VMP1Q96GC9 406 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 IMMP1LQ96LU5 166 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 ZNF700Q9H0M5 742 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 MTHFD2LQ9H903 347 aaPredicted RBP9.43□□□□□ -0.9
SRP54-208ENST00000555557 ZNF160Q9HCG1 818 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 ARMC1Q9NVT9 282 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 CALML5Q9NZT1 146 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 ZNF451Q9Y4E5 1061 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 CACNA1AO00555 2505 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 NSG1A0A0A6YYJ2 146 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 FRG2CA6NGY1 282 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 TMEM200CA6NKL6 621 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 OR6C76A6NM76 312 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 IQCJ-SCHIP1C9J366 451 aaPredicted RBP9.43□□□□□ -0.9
SRP54-208ENST00000555557 WWP2O00308 870 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 ZNF354AO60765 605 aaPredicted RBP9.43□□□□□ -0.9
SRP54-208ENST00000555557 DIRAS1O95057 198 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 EPPINO95925 133 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 ALPPP05187 535 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 FESP07332 822 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 PABPC4LP0CB38 370 aaKnown RBP9.43□□□□□ -0.9
SRP54-208ENST00000555557 DRD5P21918 477 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 YAP1P46937 504 aaKnown RBP9.43□□□□□ -0.9
SRP54-208ENST00000555557 KCNJ5P48544 419 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 VLDLRP98155 873 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 SLC34A1Q06495 639 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 FLYWCH1Q4VC44 716 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 ZNF311Q5JNZ3 666 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 PRAMEF8Q5VWM4 474 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 PRAMEF7Q5VXH5 474 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 HMBOX1Q6NT76 420 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 NDUFAF7Q7L592 441 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 VASH2Q86V25 355 aa9.43□□□□□ -0.9
SRP54-208ENST00000555557 ZNF619Q8N2I2 560 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms