RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 NLRP14Q86W24 1093 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 FAM228AQ86W67 206 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 SLC39A11Q8N1S5 342 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 SFRP1Q8N474 314 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 CLEC1AQ8NC01 280 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 STKLD1Q8NE28 680 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 GMCL1P1Q8NEA9 526 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 OR9Q2Q8NGE9 314 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 OR10G7Q8NGN6 311 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 C11orf45Q8TAV5 145 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 GANCQ8TET4 914 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 HAS2Q92819 552 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 CASD1Q96PB1 797 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 DDX50Q9BQ39 737 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 SYT11Q9BT88 431 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 MCRIP2Q9BUT9 160 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ACAT2Q9BWD1 397 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 WWTR1Q9GZV5 400 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 TSPYL1Q9H0U9 437 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 FNDC4Q9H6D8 234 aaPredicted RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ZDHHC6Q9H6R6 413 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 TMEM9BQ9NQ34 198 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 DNAJC11Q9NVH1 559 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 COMMD8Q9NX08 183 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 NDE1Q9NXR1 346 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 NLGN3Q9NZ94 848 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 NYAP2Q9P242 653 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF319Q9P2F9 582 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 KLK11Q9UBX7 282 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ASIC3Q9UHC3 531 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 PSORS1C1Q9UIG5 152 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 PILRAQ9UKJ1 303 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ERVK-19Q9WJR5 959 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 PIN4Q9Y237 131 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 KCNK6Q9Y257 313 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 HES2Q9Y543 173 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ETV7Q9Y603 341 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 MED13Q9UHV7 2174 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 RP1P56715 2156 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ATP6AP2A0A1C7CYW4 349 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 MEX3AA1L020 520 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 H7C423 109 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 I3L4J1 428 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 CDX4O14627 284 aaPredicted RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 TFECO14948 347 aaPredicted RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 INPP4BO15327 924 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 P2RX6O15547 441 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 PSMD3O43242 534 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 TNFSF12O43508 249 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 CHMP2AO43633 222 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 NXPH4O95158 308 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 FGF19O95750 216 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ANGPTL1O95841 491 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 OLFM2O95897 454 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 EPOP01588 193 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF806P0C7X5 589 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 TRIM49P0CI25 452 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 TRIM49CP0CI26 452 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 P4HA1P13674 534 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ANPEPP15144 967 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 EZRP15311 586 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 FERP16591 822 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 BCKDHBP21953 392 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 UGT1A4P22310 534 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 NMT1P30419 496 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 KIF5BP33176 963 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 PTGER3P43115 390 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 SLC11A1P49279 550 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 CCR4P51679 360 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 EVCP57679 992 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 NLRP11P59045 1033 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ERVK-16P61578 105 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 CCDC173Q0VFZ6 552 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 AP1B1Q10567 949 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 CALCOCO2Q13137 446 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 CBX3Q13185 183 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF177Q13360 481 aaPredicted RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 PDE7AQ13946 482 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 GIT2Q14161 759 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 LASP1Q14847 261 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 FASTKD3Q14CZ7 662 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 SPHARQ15513 63 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 UBE2SQ16763 222 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 LIN9Q5TKA1 542 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 FAAP20Q6NZ36 180 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ALKBH5Q6P6C2 394 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 TMEM184AQ6ZMB5 413 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 C3P1Q6ZMU1 363 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 SERPINA12Q8IW75 414 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 CNTN4Q8IWV2 1026 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 METTL4Q8N3J2 472 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 FBXW8Q8N3Y1 598 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 TRPV3Q8NET8 790 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 OR52B6Q8NGF0 335 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 RNASE8Q8TDE3 154 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 GPR148Q8TDV2 347 aa1.27□□□□□ -2.21
PRPF39-208ENST00000554785 GTF3AQ92664 365 aaKnown RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 PRCCQ92733 491 aaPredicted RBP1.27□□□□□ -2.21
PRPF39-208ENST00000554785 ZNF707Q96C28 371 aaPredicted RBP1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms