RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 TUBG2Q9NRH3 451 aa13.22□□□□□ -0.29
VTI1B-204ENST00000554659 RGPD8O14715 1765 aaPredicted RBP13.22□□□□□ -0.29
VTI1B-204ENST00000554659 TP53I11O14683 189 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 B4GAT1O43505 415 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 ZNF35P13682 527 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 DDCP20711 480 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 CD34P28906 385 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 RORAP35398 523 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 NR0B1P51843 470 aaKnown RBP13.21□□□□□ -0.29
VTI1B-204ENST00000554659 METTL11BQ5VVY1 283 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 SLC18B1Q6NT16 456 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 MDGA1Q8NFP4 955 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 SAMD8Q96LT4 415 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 ACPTQ9BZG2 426 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 ATE1O95260 518 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 CCL5P13501 91 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 CPOXP36551 454 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 PTH2RP49190 550 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 BATFQ16520 125 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 TAZQ16635 292 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 CNOT9Q92600 299 aaKnown RBP13.21□□□□□ -0.29
VTI1B-204ENST00000554659 BMFQ96LC9 184 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 MS4A4EQ96PG1 132 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 ATOH8Q96SQ7 321 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 CLMPQ9H6B4 373 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 DMRT3Q9NQL9 472 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 CLDND1Q9NY35 253 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 OR6C6A6NF89 314 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 IGLON5A6NGN9 336 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 SCO2O43819 266 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 SC5DO75845 299 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 GBX1Q14549 363 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 LEG1Q6P5S2 330 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 OR5AK2Q8NH90 309 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 TCTEX1D2Q8WW35 142 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 DZANK1Q9NVP4 752 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 SLC7A11Q9UPY5 501 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 CACNG2Q9Y698 323 aa13.21□□□□□ -0.29
VTI1B-204ENST00000554659 A0A1W2PQU0 124 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 FAM221BA6H8Z2 402 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 VSTM5A8MXK1 200 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF254O75437 659 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 SYN1P17600 705 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 SOX3P41225 446 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 IDH3GP51553 393 aaPredicted RBP13.21□□□□□ -0.3
VTI1B-204ENST00000554659 PIN1Q13526 163 aaPredicted RBP13.21□□□□□ -0.3
VTI1B-204ENST00000554659 TMEM164Q5U3C3 297 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 CBLL1Q75N03 491 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 B3GNT8Q7Z7M8 397 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 DNAJA3Q96EY1 480 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 COQ10AQ96MF6 247 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 MYH7P12883 1935 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 OTOL1A6NHN0 477 aaPredicted RBP13.21□□□□□ -0.3
VTI1B-204ENST00000554659 M0R3H8 397 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 METTL27Q8N6F8 245 aaPredicted RBP13.21□□□□□ -0.3
VTI1B-204ENST00000554659 PXYLP1Q8TE99 480 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 GAB3Q8WWW8 586 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 CIDECQ96AQ7 238 aaPredicted RBP13.21□□□□□ -0.3
VTI1B-204ENST00000554659 HOXD1Q9GZZ0 328 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 MMP28Q9H239 520 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 UNKLQ9H9P5 680 aaKnown RBP13.21□□□□□ -0.3
VTI1B-204ENST00000554659 THSD1Q9NS62 852 aa13.21□□□□□ -0.3
VTI1B-204ENST00000554659 NRXN3Q9Y4C0 1643 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 PIGBOS1A0A0B4J2F0 54 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 CLDN24A6NM45 220 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 NDUFB2O95178 105 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF865P0CJ78 1059 aaPredicted RBP13.2□□□□□ -0.3
VTI1B-204ENST00000554659 FOSL1P15407 271 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 PTPN6P29350 595 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 LCTLQ6UWM7 567 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 CPOQ8IVL8 374 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 PIANPQ8IYJ0 282 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 IL21RQ9HBE5 538 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 ANKMY1Q9P2S6 941 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 NAV1Q8NEY1 1877 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 TRIM64BA6NI03 449 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 CAPNS1P04632 268 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 CTHP32929 405 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 RGS6P49758 472 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 NNATQ16517 81 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 C3orf58Q8NDZ4 430 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 OR5W2Q8NH69 310 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 ASF1BQ9NVP2 202 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 UBE2J1Q9Y385 318 aaPredicted RBP13.2□□□□□ -0.3
VTI1B-204ENST00000554659 NPIPB15A6NHN6 443 aaPredicted RBP13.2□□□□□ -0.3
VTI1B-204ENST00000554659 NPIPA2E9PIF3 369 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 NPIPA3F8WFD2 350 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 IL33O95760 270 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 SGCAQ16586 387 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 INAVAQ3KP66 663 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 RAB41Q5JT25 222 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 MAMDC2Q7Z304 686 aaPredicted RBP13.2□□□□□ -0.3
VTI1B-204ENST00000554659 SLC7A13Q8TCU3 470 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 GLYATL2Q8WU03 294 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 PDE7BQ9NP56 450 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 MEIS3P2A8K0S8 358 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 ARPC5O15511 151 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 RFPL3O75679 317 aa13.2□□□□□ -0.3
VTI1B-204ENST00000554659 KLF8O95600 359 aaPredicted RBP13.2□□□□□ -0.3
VTI1B-204ENST00000554659 AMY2AP04746 511 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms