RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 FOLH1Q04609 750 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 BIKQ13323 160 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 PGS1Q32NB8 556 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 KRTCAP3Q53RY4 240 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 INTS11Q5TA45 600 aaKnown RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 HIST2H2BCQ6DN03 193 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 OR4F3Q6IEY1 312 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 PPP4R4Q6NUP7 873 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 NUDT13Q86X67 352 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 OR4N5Q8IXE1 308 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 MICU2Q8IYU8 434 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 METTL4Q8N3J2 472 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 PTPMT1Q8WUK0 201 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 ASB15Q8WXK1 588 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 ANKRD9Q96BM1 317 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 PPWD1Q96BP3 646 aaKnown RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 COQ8BQ96D53 544 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 CENPNQ96H22 339 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 MAGED4Q96JG8 741 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF597Q96LX8 424 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 FRMD6Q96NE9 622 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 PHF12Q96QT6 1004 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 PRPF18Q99633 342 aaKnown RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 INPP5KQ9BT40 448 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 IKZF5Q9H5V7 419 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 COQ10BQ9H8M1 238 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 TRIM45Q9H8W5 580 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 LIN28AQ9H9Z2 209 aaKnown RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 TIMMDC1Q9NPL8 285 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 LYARQ9NX58 379 aaKnown RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 ATP6V1HQ9UI12 483 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 SCOCQ9UIL1 159 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 BTNL2Q9UIR0 455 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 SH3BGRL2Q9UJC5 107 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF223Q9UK11 482 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-214ENST00000554604 NPIPA1Q9UND3 350 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 ATG4BQ9Y4P1 393 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 GMEB1Q9Y692 573 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 CACNA1CQ13936 2221 aa11.5□□□□□ -0.57
SHMT2-214ENST00000554604 CELSR2Q9HCU4 2923 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 TEX15Q9BXT5 2789 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 ELOVL7A1L3X0 281 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 A6NHS1 94 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 A8MVJ9 347 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 WWP2O00308 870 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 RFXANKO14593 260 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 GSTA4O15217 222 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 PROM1O43490 865 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 PCDH7O60245 1069 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 FGF17O60258 216 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 PRKNO60260 465 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-214ENST00000554604 ZG16O60844 167 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 LYNP07948 512 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 FAM58BPP0C7Q3 252 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 NR2F6P10588 404 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF24P17028 368 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 BSGP35613 385 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 STT3AP46977 705 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF763Q0D2J5 394 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 ATP6AP1Q15904 470 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 GTDC1Q4AE62 458 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 ANXA8L1Q5VT79 327 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 C18orf63Q68DL7 685 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 DNAJC14Q6Y2X3 702 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-214ENST00000554604 C16orf47Q6ZP98 133 aaPredicted RBP11.49□□□□□ -0.57
SHMT2-214ENST00000554604 FKBP9P1Q75LS8 142 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 AMIGO2Q86SJ2 522 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF227Q86WZ6 799 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 POGLUT1Q8NBL1 392 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 OR7A2PQ8NGA2 310 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 OR5L2Q8NGL0 311 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 OR10A6Q8NH74 314 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 SLC2A12Q8TD20 617 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 FAM120BQ96EK7 910 aaKnown RBP11.49□□□□□ -0.57
SHMT2-214ENST00000554604 GPR137Q96N19 417 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 C9orf16Q9BUW7 83 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 DUSP26Q9BV47 211 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 SEMA6AQ9H2E6 1030 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 YY1AP1Q9H869 796 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 DDX31Q9H8H2 851 aaKnown RBP11.49□□□□□ -0.57
SHMT2-214ENST00000554604 MYNNQ9NPC7 610 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 SLC6A13Q9NSD5 602 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 HPF1Q9NWY4 346 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 AHSPQ9NZD4 102 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 MYOTQ9UBF9 498 aa11.49□□□□□ -0.57
SHMT2-214ENST00000554604 A0A0A6YYD5 115 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 ARHGAP10A1A4S6 786 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 GLOD5A6NK44 160 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 EVPLLA8MZ36 301 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 CXCR6O00574 342 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 CCL21O00585 134 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 TFECO14948 347 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 ASNA1O43681 348 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 OR10H2O60403 315 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 SLC19A2O60779 497 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 PRKRAO75569 313 aaKnown RBP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 SMNDC1O75940 238 aaKnown RBP eCLIP11.48□□□□□ -0.57
SHMT2-214ENST00000554604 SEMA3DO95025 777 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 CLDN1O95832 211 aa11.48□□□□□ -0.57
SHMT2-214ENST00000554604 GBAP04062 536 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms