RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 SLCO1B7G3V0H7 640 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 UPK1AO00322 258 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 AKAP10O43572 662 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 REM1O75628 298 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 KRT16P08779 473 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 ENDOUP21128 410 aaKnown RBP11.95□□□□□ -0.5
SHMT2-211ENST00000554310 IL12BP29460 328 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 PSG6Q00889 435 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 HSPB3Q12988 150 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 MAD2L1Q13257 205 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-211ENST00000554310 ZNHIT3Q15649 155 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-211ENST00000554310 EMC4Q5J8M3 183 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 C6orf136Q5SQH8 315 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 FNDC7Q5VTL7 733 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 TIGD3Q6B0B8 471 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 HIST2H2BCQ6DN03 193 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 TMEM211Q6ICI0 200 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 ANKRD26P1Q6NSI1 321 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 C3P1Q6ZMU1 363 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 LIX1Q8N485 282 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 TMCO6Q96DC7 493 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 NODALQ96S42 347 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 ACSS1Q9NUB1 689 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-211ENST00000554310 GIMAP2Q9UG22 337 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 BAIAP2L1Q9UHR4 511 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 TRIM33Q9UPN9 1127 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 OR10H1Q9Y4A9 318 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 FREM3P0C091 2139 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 TEX15Q9BXT5 2789 aa11.95□□□□□ -0.5
SHMT2-211ENST00000554310 SNPHO15079 494 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 SCAMP2O15127 329 aaKnown RBP11.94□□□□□ -0.5
SHMT2-211ENST00000554310 TSPAN2O60636 221 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 WDR1O75083 606 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 PEX11AO75192 247 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 CLDN14O95500 239 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 HPNP05981 417 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 PRPS2P11908 318 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 ACVR2AP27037 513 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 PTPN6P29350 595 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 GPC1P35052 558 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 DCTP40126 519 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 FRKP42685 505 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-211ENST00000554310 IDH3AP50213 366 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 CDK9P50750 372 aaKnown RBP11.94□□□□□ -0.5
SHMT2-211ENST00000554310 PNLIPRP2P54317 469 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 PTGR1Q14914 329 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 CYP27C1Q4G0S4 372 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 GXYLT1Q4G148 440 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 ZNF385BQ569K4 471 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 WLSQ5T9L3 541 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 EPGNQ6UW88 154 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 ANGPTL8Q6UXH0 198 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 ACAD11Q709F0 780 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 LARP4Q71RC2 724 aaKnown RBP eCLIP11.94□□□□□ -0.5
SHMT2-211ENST00000554310 ZNF551Q7Z340 670 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-211ENST00000554310 MAVSQ7Z434 540 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 SLC44A2Q8IWA5 706 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-211ENST00000554310 ZNF781Q8N8C0 355 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 FNDC5Q8NAU1 212 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 NEIL3Q8TAT5 605 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 CIDECQ96AQ7 238 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-211ENST00000554310 TUBGCP3Q96CW5 907 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 DTNBP1Q96EV8 351 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 C3orf30Q96M34 536 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 ADOQ96SZ5 270 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 EBF4Q9BQW3 602 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 LMF2Q9BU23 707 aaKnown RBP11.94□□□□□ -0.5
SHMT2-211ENST00000554310 C1orf50Q9BV19 199 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 CCDC106Q9BWC9 280 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 SLC6A15Q9H2J7 730 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 Q9N2J8 555 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 PNPLA3Q9NST1 481 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 ASIC5Q9NY37 505 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 COQ3Q9NZJ6 369 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 SH3BP4Q9P0V3 963 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 SPRR3Q9UBC9 169 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 ATP6V1HQ9UI12 483 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 PCDHGB3Q9Y5G1 929 aa11.94□□□□□ -0.5
SHMT2-211ENST00000554310 ICOSLGO75144 302 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 NME6O75414 186 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-211ENST00000554310 HOXD4P09016 255 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-211ENST00000554310 COL8A1P27658 744 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 PTGER4P35408 488 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 PTGDSP41222 190 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 RPL14P50914 215 aaKnown RBP11.93□□□□□ -0.5
SHMT2-211ENST00000554310 MLC1Q15049 377 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 SNCBQ16143 134 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 PDCD2Q16342 344 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-211ENST00000554310 ZNF630Q2M218 657 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-211ENST00000554310 SMU1Q2TAY7 513 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 VPS26BQ4G0F5 336 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 METTL21CQ5VZV1 264 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 NCCRP1Q6ZVX7 275 aaPredicted RBP11.93□□□□□ -0.5
SHMT2-211ENST00000554310 MARVELD2Q8N4S9 558 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 NATD1Q8N6N6 113 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 OR5M9Q8NGP3 310 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 OR1J4Q8NGS1 313 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 CEP70Q8NHQ1 597 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 RNF138Q8WVD3 245 aa11.93□□□□□ -0.5
SHMT2-211ENST00000554310 MS4A4EQ96PG1 132 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms