RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 PLXDC2Q6UX71 529 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 ZYG11AQ6WRX3 759 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 P4HA3Q7Z4N8 544 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 KIF18AQ8NI77 898 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 RRAGDQ9NQL2 400 aaPredicted RBP16.99■□□□□ 0.31
CPSF2-203ENST00000554290 DDX18Q9NVP1 670 aaKnown RBP16.99■□□□□ 0.31
CPSF2-203ENST00000554290 ABCG2Q9UNQ0 655 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 NF1P21359 2839 aa16.99■□□□□ 0.31
CPSF2-203ENST00000554290 SH3D21A4FU49 640 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 A8MXE2 369 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 G3V2L1 256 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 HCRTR2O43614 444 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 SCO2O43819 266 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 DIAPH2O60879 1101 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 FAM153BP0C7A2 387 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 TCEA1P23193 301 aaKnown RBP16.98■□□□□ 0.31
CPSF2-203ENST00000554290 MC3RP41968 323 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 CLK3P49761 638 aaKnown RBP16.98■□□□□ 0.31
CPSF2-203ENST00000554290 FOXA1P55317 472 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 EEFSECP57772 596 aaKnown RBP16.98■□□□□ 0.31
CPSF2-203ENST00000554290 FAM153CQ494X1 144 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 CFAP157Q5JU67 520 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 TMEM107Q6UX40 140 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 TRIM46Q7Z4K8 759 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 MEIOBQ8N635 442 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.98■□□□□ 0.31
CPSF2-203ENST00000554290 DSN1Q9H410 356 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 PTGES2Q9H7Z7 377 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 Q9N2J8 555 aa16.98■□□□□ 0.31
CPSF2-203ENST00000554290 PRRC2AP48634 2157 aaKnown RBP16.97■□□□□ 0.31
CPSF2-203ENST00000554290 A0A1W2PNV4 684 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 LINC01387J3KSC0 135 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 UPK1AO00322 258 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 FADS1O60427 444 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 RSL1D1O76021 490 aaKnown RBP16.97■□□□□ 0.31
CPSF2-203ENST00000554290 TGM6O95932 706 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 HK1P19367 917 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 CCT5P48643 541 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 PSMD4P55036 377 aaKnown RBP16.97■□□□□ 0.31
CPSF2-203ENST00000554290 B3GALT5-AS1P59052 145 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 GANABQ14697 944 aaKnown RBP16.97■□□□□ 0.31
CPSF2-203ENST00000554290 DEFB113Q30KQ7 82 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 CCDC153Q494R4 210 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 RAET1LQ5VY80 246 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 NOXRED1Q6NXP6 359 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 FRMD7Q6ZUT3 714 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 IKBIPQ70UQ0 350 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 UBQLNLQ8IYU4 475 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 OR2L13Q8N349 312 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 FADS6Q8N9I5 356 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 MZB1Q8WU39 189 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 AMDHD1Q96NU7 426 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 TXLNGYQ9BZA5 131 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 GLIPR2Q9H4G4 154 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 PLEKHF2Q9H8W4 249 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 FAM120CQ9NX05 1096 aaKnown RBP16.97■□□□□ 0.31
CPSF2-203ENST00000554290 EMCNQ9ULC0 261 aa16.97■□□□□ 0.31
CPSF2-203ENST00000554290 POLR3HQ9Y535 204 aaPredicted RBP16.97■□□□□ 0.31
CPSF2-203ENST00000554290 DOCK7Q96N67 2140 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 MAP1AP78559 2803 aaPredicted RBP16.96■□□□□ 0.31
CPSF2-203ENST00000554290 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 A0A1W2PPM1 405 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 SLC22A20A6NK97 555 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 MSTNO14793 375 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 TNFSF13O75888 250 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 ATE1O95260 518 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 PROCP04070 461 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 HRGP04196 525 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 FOSL1P15407 271 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 DNAJB13P59910 316 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 FOXD4Q12950 439 aaPredicted RBP16.96■□□□□ 0.31
CPSF2-203ENST00000554290 PRSS53Q2L4Q9 553 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 OR2M3Q8NG83 312 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 SMPDL3BQ92485 455 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 ELP4Q96EB1 424 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 METTL2AQ96IZ6 378 aaKnown RBP16.96■□□□□ 0.31
CPSF2-203ENST00000554290 RHOXF2Q9BQY4 288 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 C3orf14Q9HBI5 128 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 MED11Q9P086 117 aa16.96■□□□□ 0.31
CPSF2-203ENST00000554290 EIF3LQ9Y262 564 aaKnown RBP16.96■□□□□ 0.31
CPSF2-203ENST00000554290 HRNRQ86YZ3 2850 aaPredicted RBP16.95■□□□□ 0.3
CPSF2-203ENST00000554290 AKAP6Q13023 2319 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 TTC36A6NLP5 189 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 B4DXG7 233 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 SEC22BO75396 215 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 SMNDC1O75940 238 aaKnown RBP eCLIP16.95■□□□□ 0.3
CPSF2-203ENST00000554290 PSMG1O95456 288 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 IL33O95760 270 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 IFI6P09912 130 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 UROSP10746 265 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 CPOXP36551 454 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 PCYT1AP49585 367 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 ADAM8P78325 824 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 STX5Q13190 355 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 KRTAP21-3Q3LHN1 58 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 CNEP1R1Q8N9A8 125 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 DUSP19Q8WTR2 217 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 PIGQQ9BRB3 760 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 TBL1XR1Q9BZK7 514 aa16.95■□□□□ 0.3
CPSF2-203ENST00000554290 IQCGQ9H095 443 aaKnown RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms