RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 KELP23276 732 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 POU1F1P28069 291 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 BSGP35613 385 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 HMGA2P52926 109 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 CDK3Q00526 305 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 IL18Q14116 193 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 FLYWCH1Q4VC44 716 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 CRB2Q5IJ48 1285 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 TANGO2Q6ICL3 276 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 CNIH2Q6PI25 160 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 ADAMTSL4Q6UY14 1074 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 USP30Q70CQ3 517 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 DCUN1D3Q8IWE4 304 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 TIGD4Q8IY51 512 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 OXR1Q8N573 874 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 C7orf57Q8NEG2 295 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 SMARCD2Q92925 531 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 TM4SF18Q96CE8 201 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 IL4I1Q96RQ9 567 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-207ENST00000553837 SLC28A3Q9HAS3 691 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 ACER3Q9NUN7 267 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 RHCGQ9UBD6 479 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 COMMD3Q9UBI1 195 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 SERGEFQ9UGK8 458 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 UBQLN2Q9UHD9 624 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 RAB23Q9ULC3 237 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 KIF26AQ9ULI4 1882 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-207ENST00000553837 A8MUA0 341 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 H7BY64 318 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 TLR4O00206 839 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 PPM1DO15297 605 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 LATO43561 262 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 PPM1BO75688 479 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 POU2F2P09086 479 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 CPEP16870 476 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 XCR1P46094 333 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 LIMS1P48059 325 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 CCT3P49368 545 aaKnown RBP11.51□□□□□ -0.57
SHMT2-207ENST00000553837 EVX1P49640 407 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 RBBP4Q09028 425 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 MADCAM1Q13477 382 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 ELOAQ14241 798 aaKnown RBP11.51□□□□□ -0.57
SHMT2-207ENST00000553837 PUM1Q14671 1186 aaKnown RBP eCLIP11.51□□□□□ -0.57
SHMT2-207ENST00000553837 GANABQ14697 944 aaKnown RBP11.51□□□□□ -0.57
SHMT2-207ENST00000553837 KHDRBS2Q5VWX1 349 aaKnown RBP11.51□□□□□ -0.57
SHMT2-207ENST00000553837 METRNLQ641Q3 311 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 TRIM40Q6P9F5 258 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 FBXO46Q6PJ61 603 aaPredicted RBP11.51□□□□□ -0.57
SHMT2-207ENST00000553837 TMEM107Q6UX40 140 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 LUZP2Q86TE4 346 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 HORMAD2Q8N7B1 307 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 IL17RCQ8NAC3 791 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 LINC01555Q8NAE3 123 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 OR5K2Q8NHB8 316 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 SUSD6Q92537 303 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 PRAP1Q96NZ9 151 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 PIP5K1AQ99755 562 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 KATNB1Q9BVA0 655 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 MS4A8Q9BY19 250 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 HDAC8Q9BY41 377 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 RHBGQ9H310 441 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 HEXA-AS1Q9H8Q6 139 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 CERS4Q9HA82 394 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 IFT46Q9NQC8 304 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 PRELID3BQ9Y3B1 194 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 OR1A2Q9Y585 309 aa11.51□□□□□ -0.57
SHMT2-207ENST00000553837 TRPM6Q9BX84 2022 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 CCDC88CQ9P219 2028 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 ATG2AQ2TAZ0 1938 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 ARRDC5A6NEK1 342 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 ISM1B1AKI9 464 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 FAM227AF5H4B4 570 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 MID1O15344 667 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 CHP2O43745 196 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 TMPRSS11DO60235 418 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 GADD45GO95257 159 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 ALDH6A1Q02252 535 aaKnown RBP11.5□□□□□ -0.57
SHMT2-207ENST00000553837 FCN2Q15485 313 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 C2orf27AQ580R0 203 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 TMEM201Q5SNT2 666 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 TNFAIP8L2Q6P589 184 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-207ENST00000553837 WASH2PQ6VEQ5 465 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 UBE3DQ7Z6J8 389 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 LRRTM4Q86VH4 590 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 C17orf64Q86WR6 236 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 AQP11Q8NBQ7 271 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 UFD1Q92890 307 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 TMEM203Q969S6 136 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 UBE2E3Q969T4 207 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 FBXW5Q969U6 566 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 WFDC6Q9BQY6 131 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 AICDAQ9GZX7 198 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 B3GAT2Q9NPZ5 323 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 MIEF1Q9NQG6 463 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 THAP10Q9P2Z0 257 aaPredicted RBP11.5□□□□□ -0.57
SHMT2-207ENST00000553837 GLS2Q9UI32 602 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 ICKQ9UPZ9 632 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 GSTK1Q9Y2Q3 226 aa11.5□□□□□ -0.57
SHMT2-207ENST00000553837 ASB4Q9Y574 426 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms