RNA–Protein interactions for RNA: ENST00000553816.5

RDH11-205, Transcript of retinol dehydrogenase 11, humanhuman

TSL 2

Gene RDH11, Length 1,163 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-205ENST00000553816 SLC22A16Q86VW1 577 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 SPPL2CQ8IUH8 684 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 TRIM42Q8IWZ5 723 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 DND1Q8IYX4 353 aaKnown RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 CLEC4FQ8N1N0 589 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 GHDCQ8N2G8 530 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 SLC16A11Q8NCK7 471 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 NUP43Q8NFH3 380 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 PIWIL2Q8TC59 973 aaKnown RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 HOXB13Q92826 284 aaPredicted RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 FAM120BQ96EK7 910 aaKnown RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 ZBED6CLQ96FA7 236 aaPredicted RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 SLC35A4Q96G79 324 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 MAELQ96JY0 434 aaKnown RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 MARK4Q96L34 752 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 JSRP1Q96MG2 331 aaPredicted RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 RILPQ96NA2 401 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 GNRHR2Q96P88 292 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 ADOQ96SZ5 270 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 YIPF4Q9BSR8 244 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 LMF2Q9BU23 707 aaKnown RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 DOHHQ9BU89 302 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 DUSP26Q9BV47 211 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 RTN4RQ9BZR6 473 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 DPY30Q9C005 99 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 BHLHE41Q9C0J9 482 aaPredicted RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 ZNF703Q9H7S9 590 aaPredicted RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 IL1RL2Q9HB29 575 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 FBXO34Q9NWN3 711 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 SLC5A6Q9Y289 635 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 GPR45Q9Y5Y3 372 aa7.5□□□□□ -1.21
RDH11-205ENST00000553816 HELZ2Q9BYK8 2649 aaKnown RBP7.5□□□□□ -1.21
RDH11-205ENST00000553816 UQCRHLA0A096LP55 91 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 OR6C70A6NIJ9 312 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 EMC8O43402 210 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 COQ9O75208 318 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 SLITRK5O94991 958 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 NKX2-2O95096 273 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 IGHG3P01860 377 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 HMGN2P05204 90 aaKnown RBP7.49□□□□□ -1.21
RDH11-205ENST00000553816 IFI6P09912 130 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 GABRA3P34903 492 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 ZFP36L2P47974 494 aaKnown RBP7.49□□□□□ -1.21
RDH11-205ENST00000553816 TMED10P49755 219 aaKnown RBP7.49□□□□□ -1.21
RDH11-205ENST00000553816 PNLIPRP2P54317 469 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 GAS1P54826 345 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 DUSP5Q16690 384 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 LSM12Q3MHD2 195 aaKnown RBP7.49□□□□□ -1.21
RDH11-205ENST00000553816 SPANXN4Q5MJ08 99 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 HIST2H2BCQ6DN03 193 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 MFSD12Q6NUT3 480 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 TMEM81Q6P7N7 255 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 BNC2Q6ZN30 1099 aaPredicted RBP7.49□□□□□ -1.21
RDH11-205ENST00000553816 TRILQ7L0X0 811 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 SZRD1Q7Z422 152 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 ANKRD46Q86W74 232 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 DOLPP1Q86YN1 238 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 FAM109AQ8N4B1 249 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 RPRMLQ8N4K4 120 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 WDSUB1Q8N9V3 476 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 OR5AK3PQ8NH89 298 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 ZFP28Q8NHY6 868 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 PSMA8Q8TAA3 256 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 LRRC8CQ8TDW0 803 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 SSC4DQ8WTU2 575 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 RNF138Q8WVD3 245 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 OR5P2Q8WZ92 322 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 SLC9A6Q92581 669 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 RELTQ969Z4 430 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 TMEM41AQ96HV5 264 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 COL21A1Q96P44 957 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 SECISBP2Q96T21 854 aaKnown RBP7.49□□□□□ -1.21
RDH11-205ENST00000553816 EBF4Q9BQW3 602 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 OSBPL11Q9BXB4 747 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 SLC6A15Q9H2J7 730 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 UBQLN3Q9H347 655 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 ZFP64Q9NPA5 681 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 ZCCHC3Q9NUD5 404 aaKnown RBP7.49□□□□□ -1.21
RDH11-205ENST00000553816 INTS9Q9NV88 658 aaKnown RBP7.49□□□□□ -1.21
RDH11-205ENST00000553816 AIG1Q9NVV5 245 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 SPRR3Q9UBC9 169 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 CBLCQ9ULV8 474 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 OR10H1Q9Y4A9 318 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 SNX8Q9Y5X2 465 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 KCNE3Q9Y6H6 103 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 USH1CQ9Y6N9 552 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 DOPEY2Q9Y3R5 2298 aa7.49□□□□□ -1.21
RDH11-205ENST00000553816 A1L4Q6 167 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 PRAMEF25A6NGN4 478 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 TRPC5OSA6NMA1 111 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 CYSRT1A8MQ03 144 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 NPIPA2E9PIF3 369 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 NPIPA3F8WFD2 350 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 ACOT7O00154 380 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 CCL21O00585 134 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 FADS1O60427 444 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 ZG16O60844 167 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 CPSF4O95639 269 aaKnown RBP7.48□□□□□ -1.21
RDH11-205ENST00000553816 IL33O95760 270 aa7.48□□□□□ -1.21
RDH11-205ENST00000553816 CLDN1O95832 211 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms