RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 DOK4Q8TEW6 326 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMEM255BQ8WV15 326 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 PMM1Q92871 262 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 ATF6BQ99941 703 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMEM246Q9BRR3 403 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 MED18Q9BUE0 208 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 RNF121Q9H920 327 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CLCA2Q9UQC9 943 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 CSNK1G3Q9Y6M4 447 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 SZT2Q5T011 3432 aa6.49□□□□□ -1.37
LINC-ROR-201ENST00000553704 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 A0A0G2JPF8 293 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 PRR23AA6NEV1 266 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 HNRNPCL2B2RXH8 293 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 HNRNPCL3B7ZW38 293 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 GABRPO00591 440 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 CASKO14936 926 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 PCDH8O95206 1070 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 ALPPP05187 535 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 HNRNPCL4P0DMR1 293 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 GSTM3P21266 225 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 RPS5P46782 204 aaKnown RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 VEGFBP49765 207 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 TRA2BP62995 288 aaKnown RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 UBE3AQ05086 875 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC9A5Q14940 896 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 TRAM2Q15035 370 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 NDUFA5Q16718 116 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 EOGTQ5NDL2 527 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SNAP47Q5SQN1 464 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC48A1Q6P1K1 146 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 RASSF6Q6ZTQ3 369 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 MARCH9Q86YJ5 346 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 NRMQ8IXM6 262 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 GDPD1Q8N9F7 314 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMEM145Q8NBT3 493 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 GALNT6Q8NCL4 622 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 NUP43Q8NFH3 380 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 OR52E1Q8NGJ3 308 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SFXN5Q8TD22 340 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 GNPDA2Q8TDQ7 276 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SPRYD4Q8WW59 207 aaPredicted RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 UPRTQ96BW1 309 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 ARMC5Q96C12 935 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 CHFRQ96EP1 664 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 GIMAP5Q96F15 307 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 NECTIN4Q96NY8 510 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 DEPDC7Q96QD5 511 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 HDAC8Q9BY41 377 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 PCBD2Q9H0N5 130 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 C11orf49Q9H6J7 331 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 PPP1R3EQ9H7J1 279 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 ISG20L2Q9H9L3 353 aaKnown RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 HINT3Q9NQE9 182 aaKnown RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 TMEM74BQ9NUR3 256 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 EXOSC1Q9Y3B2 195 aaKnown RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 RANBP2P49792 3224 aaKnown RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SPTBN5Q9NRC6 3674 aaKnown RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 CENPXA8MT69 81 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 KLF4O43474 513 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SCO2O43819 266 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 FAM157BP0CG42 384 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 CELP19835 753 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 FGF9P31371 208 aaPredicted RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 HSD17B2P37059 387 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 PGGHGQ32M88 737 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 C2orf27AQ580R0 203 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 IL20RBQ6UXL0 311 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 HSDL2Q6YN16 418 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZNF620Q6ZNG0 422 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 GDF7Q7Z4P5 450 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 DTX3Q8N9I9 347 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SUSD6Q92537 303 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 ELP4Q96EB1 424 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 PAWRQ96IZ0 340 aaKnown RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZNF681Q96N22 645 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SLC38A2Q96QD8 506 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SOSTQ9BQB4 213 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SPATA5L1Q9BVQ7 753 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 FAIM2Q9BWQ8 316 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 TEX101Q9BY14 249 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 CRISPLD2Q9H0B8 497 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 WDR26Q9H7D7 661 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 MED20Q9H944 212 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 MRPS30Q9NP92 439 aaKnown RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 GIMAP4Q9NUV9 329 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 ZFR2Q9UPR6 939 aaKnown RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 ENTPD4Q9Y227 616 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 ALG5Q9Y673 324 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 SIRT4Q9Y6E7 314 aaPredicted RBP6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 CLCA3PQ9Y6N3 262 aa6.48□□□□□ -1.37
LINC-ROR-201ENST00000553704 TRDV1A0A1B0GX56 115 aa6.47□□□□□ -1.37
LINC-ROR-201ENST00000553704 TTC36A6NLP5 189 aa6.47□□□□□ -1.37
LINC-ROR-201ENST00000553704 C1QTNF3-AMACRE9PGA6 284 aa6.47□□□□□ -1.37
LINC-ROR-201ENST00000553704 SMLR1H3BR10 107 aa6.47□□□□□ -1.37
LINC-ROR-201ENST00000553704 PRICKLE3O43900 615 aaPredicted RBP6.47□□□□□ -1.37
LINC-ROR-201ENST00000553704 EFCAB14O75071 495 aa6.47□□□□□ -1.37
LINC-ROR-201ENST00000553704 PAK4O96013 591 aaPredicted RBP6.47□□□□□ -1.37
LINC-ROR-201ENST00000553704 IGHA1P01876 353 aa6.47□□□□□ -1.37
LINC-ROR-201ENST00000553704 HLA-DQB1P01920 261 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms