RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CNPPD1Q9BV87 410 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 JAM3Q9BX67 310 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 LYRM4Q9HD34 91 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 NPAP1Q9NZP6 1156 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 TBC1D29Q9UFV1 150 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 SATB2Q9UPW6 733 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 ENTPD2Q9Y5L3 495 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 NCOR1O75376 2440 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 F5P12259 2224 aa12.08□□□□□ -0.48
SHMT2-205ENST00000553474 A0A087WV62 115 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 PRR23AA6NEV1 266 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 WASHC1A8K0Z3 465 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 CHST10O43529 356 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 B3GALT2O43825 422 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 AK1P00568 194 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 HMGN1P05114 100 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF888P0CJ79 500 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-205ENST00000553474 C8orf89P0DMQ9 161 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 SRFP11831 508 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 CKMT1AP12532 417 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 HOXB3P14651 431 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-205ENST00000553474 HOXB2P14652 356 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 CPN2P22792 545 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 FGF9P31371 208 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-205ENST00000553474 RPS19P39019 145 aaKnown RBP12.07□□□□□ -0.48
SHMT2-205ENST00000553474 DGKEP52429 567 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 YPEL5P62699 121 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 ACSM1Q08AH1 577 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 HSDL2Q6YN16 418 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 ABHD13Q7L211 337 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 KIF18BQ86Y91 864 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 IQCF1Q8N6M8 205 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF655Q8N720 491 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-205ENST00000553474 POGLUT1Q8NBL1 392 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 ANKK1Q8NFD2 765 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 EFHD2Q96C19 240 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-205ENST00000553474 NELL2Q99435 816 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 GPA33Q99795 319 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 MACROD1Q9BQ69 325 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 QPCTLQ9NXS2 382 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 KCMF1Q9P0J7 381 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 GSTK1Q9Y2Q3 226 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 PIAS3Q9Y6X2 628 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 SPACA6W5XKT8 324 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 C19orf67A6NJJ6 358 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 SLC30A4O14863 429 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 TSPAN19P0C672 248 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 ALPPL2P10696 532 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 GALP22466 123 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 GABRA5P31644 462 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 TNFSF8P32971 234 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 EIF2B2P49770 351 aaKnown RBP12.07□□□□□ -0.48
SHMT2-205ENST00000553474 GAS1P54826 345 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 SEC13P55735 322 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 SLC13A2Q13183 592 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 DSG2Q14126 1118 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF750Q32MQ0 723 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 ENPP7Q6UWV6 458 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 FRRS1Q6ZNA5 592 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 PLEKHM3Q6ZWE6 761 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 MBOAT2Q6ZWT7 520 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 FAM20CQ8IXL6 584 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 RNF113BQ8IZP6 322 aaKnown RBP12.07□□□□□ -0.48
SHMT2-205ENST00000553474 CLIP4Q8N3C7 705 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 OR1E3Q8WZA6 343 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 AP3S1Q92572 193 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 UFD1Q92890 307 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 RNFT2Q96EX2 444 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 SIPA1Q96FS4 1042 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 SLC35A4Q96G79 324 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 KCTD7Q96MP8 289 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 OR2A5Q96R48 311 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 TXNL4BQ9NX01 149 aaKnown RBP12.07□□□□□ -0.48
SHMT2-205ENST00000553474 MUTYHQ9UIF7 546 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 FBXL21Q9UKT6 434 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 CA14Q9ULX7 337 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 DAPP1Q9UN19 280 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 ZNF443Q9Y2A4 671 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-205ENST00000553474 WDR45Q9Y484 360 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 KCNE3Q9Y6H6 103 aa12.07□□□□□ -0.48
SHMT2-205ENST00000553474 VCANP13611 3396 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 A0A1W2PQF6 199 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 A6NCN8 305 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 BTN3A3O00478 584 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 SNPHO15079 494 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 SLC31A1O15431 190 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 KLF4O43474 513 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 FMO6PO60774 539 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 DLGAP3O95886 979 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 HNRNPA2B1P22626 353 aaKnown RBP12.06□□□□□ -0.48
SHMT2-205ENST00000553474 MAT2AP31153 395 aaKnown RBP12.06□□□□□ -0.48
SHMT2-205ENST00000553474 ETV5P41161 510 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 SLC9A3P48764 834 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 TMED10P49755 219 aaKnown RBP12.06□□□□□ -0.48
SHMT2-205ENST00000553474 ETV1P50549 477 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 PSPHP78330 225 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 LIPKQ5VXJ0 399 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 RPL13AP3Q6NVV1 102 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 FBXO42Q6P3S6 717 aa12.06□□□□□ -0.48
SHMT2-205ENST00000553474 CD200R1LQ6Q8B3 271 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms