RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 NKX2-2O95096 273 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 CLDN14O95500 239 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 KRT16P08779 473 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 LCN1P31025 176 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 EVI2BP34910 448 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 MAP3K8P41279 467 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 TRPC1P48995 793 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 DIO3P55073 304 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 NHSL2Q5HYW2 709 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 SP5Q6BEB4 398 aaPredicted RBP14□□□□□ -0.17
SHMT2-204ENST00000553324 DESI1Q6ICB0 168 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 B3GNT6Q6ZMB0 384 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 SPATA19Q7Z5L4 167 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 KRTCAP2Q8N6L1 136 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 WDSUB1Q8N9V3 476 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 CA5BP1Q8WTZ4 195 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 RNF138Q8WVD3 245 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 ASB5Q8WWX0 329 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 SLC9A6Q92581 669 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 DPY30Q9C005 99 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 RUBCNLQ9H714 662 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 VIPAS39Q9H9C1 493 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 GALNT9Q9HCQ5 603 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 EQTNQ9NQ60 294 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 ZCCHC3Q9NUD5 404 aaKnown RBP14□□□□□ -0.17
SHMT2-204ENST00000553324 GIN1Q9NXP7 522 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 ALKBH4Q9NXW9 302 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 PCDHGB4Q9UN71 923 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 HRH3Q9Y5N1 445 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 WIF1Q9Y5W5 379 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 SNX8Q9Y5X2 465 aa14□□□□□ -0.17
SHMT2-204ENST00000553324 GTF3C1Q12789 2109 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 C2orf72A6NCS6 295 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 PRSS44E7EML9 344 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 CFLARO15519 480 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 ACTL6AO96019 429 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 ALOX5P09917 674 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 CYP4B1P13584 511 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 ENDOUP21128 410 aaKnown RBP13.99□□□□□ -0.17
SHMT2-204ENST00000553324 CCT3P49368 545 aaKnown RBP13.99□□□□□ -0.17
SHMT2-204ENST00000553324 PMPCAQ10713 525 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 ZNF630Q2M218 657 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-204ENST00000553324 DPY19L1Q2PZI1 675 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 PGS1Q32NB8 556 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 ANXA8L1Q5VT79 327 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 OGFOD2Q6N063 350 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 MFSD12Q6NUT3 480 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 OR8J2Q8NGG1 315 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 OR56A1Q8NGH5 318 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 FAM120BQ96EK7 910 aaKnown RBP13.99□□□□□ -0.17
SHMT2-204ENST00000553324 GIMAP5Q96F15 307 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 ATP6V1G3Q96LB4 118 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 STACQ99469 402 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 G6PC3Q9BUM1 346 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 SLC6A15Q9H2J7 730 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 FAM120CQ9NX05 1096 aaKnown RBP13.99□□□□□ -0.17
SHMT2-204ENST00000553324 SPRR3Q9UBC9 169 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 FAF1Q9UNN5 650 aaPredicted RBP13.99□□□□□ -0.17
SHMT2-204ENST00000553324 NBPF19A0A087WUL8 3843 aa13.99□□□□□ -0.17
SHMT2-204ENST00000553324 RNASET2O00584 256 aaKnown RBP13.98□□□□□ -0.17
SHMT2-204ENST00000553324 FADS1O60427 444 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 HTR1EP28566 365 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 CHRNB4P30926 498 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 SRD5A2P31213 254 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 CLNS1AP54105 237 aaKnown RBP13.98□□□□□ -0.17
SHMT2-204ENST00000553324 C17orf67Q0P5P2 114 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 TP53BP2Q13625 1128 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 SPDYE7PQ495Y7 208 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 VASNQ6EMK4 673 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 AAGABQ6PD74 315 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 WDR53Q7Z5U6 358 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-204ENST00000553324 FAM83FQ8NEG4 500 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-204ENST00000553324 SFXN5Q8TD22 340 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 ZNF75CPQ92670 426 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-204ENST00000553324 ABTB1Q969K4 478 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-204ENST00000553324 ARL8AQ96BM9 186 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 TESCQ96BS2 214 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 SDCCAG3Q96C92 435 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 TIMP4Q99727 224 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 TBL1XR1Q9BZK7 514 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 SERHLQ9NQF3 203 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 DUSP22Q9NRW4 184 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 SIRT3Q9NTG7 399 aaPredicted RBP13.98□□□□□ -0.17
SHMT2-204ENST00000553324 PPP4R1LQ9P1A2 415 aa13.98□□□□□ -0.17
SHMT2-204ENST00000553324 NINQ8N4C6 2090 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 PRSS51A0A1B0GVH4 220 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 HMGB1P1B2RPK0 211 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-204ENST00000553324 UTS2O95399 124 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 C6orf47O95873 294 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 HMGN2P05204 90 aaKnown RBP13.97□□□□□ -0.17
SHMT2-204ENST00000553324 KITP10721 976 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 EFNA1P20827 205 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-204ENST00000553324 KIR3DL1P43629 444 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 RFX3P48380 749 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 GAS1P54826 345 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 DSCR4P56555 118 aaPredicted RBP13.97□□□□□ -0.17
SHMT2-204ENST00000553324 OCRLQ01968 901 aa13.97□□□□□ -0.17
SHMT2-204ENST00000553324 CRYZQ08257 329 aaKnown RBP13.97□□□□□ -0.17
SHMT2-204ENST00000553324 LASP1Q14847 261 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms