RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 GALNT9Q9HCQ5 603 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 ZFP64Q9NPA5 681 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 KLRF1Q9NZS2 232 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 FLRT3Q9NZU0 649 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 HRH3Q9Y5N1 445 aa12.93□□□□□ -0.34
PTCH1-226ENST00000553011 FAM234BA2RU67 622 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 C2orf72A6NCS6 295 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 ACOT7O00154 380 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 ZNHIT1O43257 154 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 ASNA1O43681 348 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 CDC40O60508 579 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTCH1-226ENST00000553011 ICOSLGO75144 302 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 KCNH1O95259 989 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 IL33O95760 270 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 C1QCP02747 245 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 IL6P05231 212 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 RFPL3SP0C7P2 107 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 TROVE2P10155 538 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTCH1-226ENST00000553011 CD1EP15812 388 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 UQCRC2P22695 453 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 MAGEA5P43359 124 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 MASP1P48740 699 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 MAN2A2P49641 1150 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 CASP9P55211 416 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 PTPN13Q12923 2485 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 CMPK2Q5EBM0 449 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 CCNJQ5T5M9 372 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 FNDC7Q5VTL7 733 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 TMEM81Q6P7N7 255 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 FIGNL1Q6PIW4 674 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 DNAJC14Q6Y2X3 702 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-226ENST00000553011 ZAR1Q86SH2 424 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 SLC22A16Q86VW1 577 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 FUNDC1Q8IVP5 155 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 COX18Q8N8Q8 333 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 GOT1L1Q8NHS2 421 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-226ENST00000553011 PRR7Q8TB68 274 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 RNF138Q8WVD3 245 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 CDS1Q92903 461 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 VPS33AQ96AX1 596 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 TMCO6Q96DC7 493 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 SLC35G5Q96KT7 338 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 ZNF597Q96LX8 424 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 PANX1Q96RD7 426 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 SIKE1Q9BRV8 207 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 TMEM120AQ9BXJ8 343 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 PIGUQ9H490 435 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 SERHLQ9NQF3 203 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 FBXO34Q9NWN3 711 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 BOKQ9UMX3 212 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-226ENST00000553011 FAF1Q9UNN5 650 aaPredicted RBP12.92□□□□□ -0.34
PTCH1-226ENST00000553011 KCNE3Q9Y6H6 103 aa12.92□□□□□ -0.34
PTCH1-226ENST00000553011 HEATR5AQ86XA9 2040 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 C17orf51A8MQB3 221 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 GNB5O14775 395 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 PDE9AO76083 593 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 KCNK2O95069 426 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 SNX4O95219 450 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 GSNP06396 782 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 CELA3AP09093 270 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 NCF2P19878 526 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-226ENST00000553011 ATP4BP51164 291 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 POU6F2P78424 691 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-226ENST00000553011 KCNC4Q03721 635 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 SQLEQ14534 574 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 HYAL4Q2M3T9 481 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 KRTCAP3Q53RY4 240 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 SAXO2Q658L1 398 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 SLC30A6Q6NXT4 461 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 BHLHB9Q6PI77 547 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 ANGPTL8Q6UXH0 198 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 PACS2Q86VP3 889 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 OR5D16Q8NGK9 328 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 FAM110BQ8TC76 370 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 ADAMTS15Q8TE58 950 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 ZNF317Q96PQ6 595 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-226ENST00000553011 OR7D2Q96RA2 312 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 STACQ99469 402 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 SLC35A5Q9BS91 424 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 BTBD2Q9BX70 525 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 ZNF703Q9H7S9 590 aaPredicted RBP12.91□□□□□ -0.34
PTCH1-226ENST00000553011 ZDHHC11Q9H8X9 412 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 DUSP22Q9NRW4 184 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 SLC6A13Q9NSD5 602 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 CCDC167Q9P0B6 97 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 MRTO4Q9UKD2 239 aaKnown RBP12.91□□□□□ -0.34
PTCH1-226ENST00000553011 OSGIN2Q9Y236 505 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 LIPGQ9Y5X9 500 aa12.91□□□□□ -0.34
PTCH1-226ENST00000553011 CCDC154A6NI56 674 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 NR5A2O00482 541 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 ADAM10O14672 748 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 SCO2O43819 266 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 FADS1O60427 444 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 UTS2O95399 124 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 KRT16P08779 473 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 MATN1P21941 496 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 EVI2BP34910 448 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 ARFIP2P53365 341 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 GYS2P54840 703 aa12.9□□□□□ -0.34
PTCH1-226ENST00000553011 PSMD4P55036 377 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms