RNA–Protein interactions for RNA: ENST00000552783.5

LIMA1-214, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LIMA1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-214ENST00000552783 HTRA3P83110 453 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 NOGQ13253 232 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 PDE7AQ13946 482 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 ZNF630Q2M218 657 aaPredicted RBP4.56□□□□□ -1.68
LIMA1-214ENST00000552783 GPR33Q49SQ1 333 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 ARHGAP15Q53QZ3 475 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 ARSIQ5FYB1 569 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 CLLU1Q5K131 121 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 RNLSQ5VYX0 342 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 FAM71E1Q6IPT2 247 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 GRHL2Q6ISB3 625 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 FAM122CQ6P4D5 195 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 FAM198BQ6UWH4 519 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 TPRG1Q6ZUI0 275 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 CHST9Q7L1S5 443 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 TMEM25Q86YD3 366 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 GPALPP1Q8IXQ4 340 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 SIRT6Q8N6T7 355 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 MORN4Q8NDC4 146 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 OR6M1Q8NGM8 313 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 OR13C5Q8NGS8 318 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 ADAMTS19Q8TE59 1207 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 AP3S1Q92572 193 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 PIGKQ92643 395 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 CLP1Q92989 425 aaKnown RBP4.56□□□□□ -1.68
LIMA1-214ENST00000552783 CAPNS2Q96L46 248 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 SECISBP2Q96T21 854 aaKnown RBP4.56□□□□□ -1.68
LIMA1-214ENST00000552783 DDOQ99489 341 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 TREX2Q9BQ50 279 aaPredicted RBP4.56□□□□□ -1.68
LIMA1-214ENST00000552783 TMEM175Q9BSA9 504 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 YIPF4Q9BSR8 244 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 BHLHE41Q9C0J9 482 aaPredicted RBP4.56□□□□□ -1.68
LIMA1-214ENST00000552783 ZCCHC4Q9H5U6 513 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 HCFC1R1Q9NWW0 138 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 NKIRAS2Q9NYR9 191 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 ZNF624Q9P2J8 865 aaPredicted RBP4.56□□□□□ -1.68
LIMA1-214ENST00000552783 TRPC4Q9UBN4 977 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 GULP1Q9UBP9 304 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 STOML2Q9UJZ1 356 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 ING4Q9UNL4 249 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 CORO2BQ9UQ03 480 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 MGAT4BQ9UQ53 548 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 LIPT1Q9Y234 373 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 RASD1Q9Y272 281 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 TMEM5Q9Y2B1 443 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 MRPS7Q9Y2R9 242 aaKnown RBP4.56□□□□□ -1.68
LIMA1-214ENST00000552783 WNT6Q9Y6F9 365 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 ALPK2Q86TB3 2170 aa4.56□□□□□ -1.68
LIMA1-214ENST00000552783 A0A1W2PS29 197 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 TMEM129A0AVI4 362 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 SLC22A23A1A5C7 686 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 TMEM189-UBE2V1I3L0A0 370 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 LINC01387J3KSC0 135 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 ATG13O75143 517 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 PRKRAO75569 313 aaKnown RBP4.55□□□□□ -1.68
LIMA1-214ENST00000552783 WNT1P04628 370 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 ALPPL2P10696 532 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 NPPBP16860 134 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 HMGA1P17096 107 aaKnown RBP4.55□□□□□ -1.68
LIMA1-214ENST00000552783 FUT1P19526 365 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 CXCL2P19875 107 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 AHCYP23526 432 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 MAPK8P45983 427 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 ASMTP46597 345 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 CNTN1Q12860 1018 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 ADAM15Q13444 863 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 SLBPQ14493 270 aaKnown RBP eCLIP4.55□□□□□ -1.68
LIMA1-214ENST00000552783 GSG1Q2KHT4 349 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 C22orf39Q6P5X5 142 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 BHLHB9Q6PI77 547 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 TMEM220Q6QAJ8 160 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 RPTNQ6XPR3 784 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 PRICKLE2Q7Z3G6 844 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 SIAH3Q8IW03 269 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 AMER3Q8N944 861 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 OR2T35Q8NGX2 323 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 OR4Q3Q8NH05 313 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 GIMAP1Q8WWP7 306 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 SMG7Q92540 1137 aaKnown RBP4.55□□□□□ -1.68
LIMA1-214ENST00000552783 SIPA1Q96FS4 1042 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 CCDC86Q9H6F5 360 aaKnown RBP4.55□□□□□ -1.68
LIMA1-214ENST00000552783 METTL17Q9H7H0 456 aaPredicted RBP4.55□□□□□ -1.68
LIMA1-214ENST00000552783 MED20Q9H944 212 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 DIABLOQ9NR28 239 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 CYSLTR2Q9NS75 346 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 CA10Q9NS85 328 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 CPNE7Q9UBL6 633 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 ASF1AQ9Y294 204 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 GSTK1Q9Y2Q3 226 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 GPR55Q9Y2T6 319 aaPredicted RBP4.55□□□□□ -1.68
LIMA1-214ENST00000552783 DYRK1BQ9Y463 629 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 CACNG2Q9Y698 323 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 CSNK1G3Q9Y6M4 447 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 URB1O60287 2271 aaKnown RBP4.55□□□□□ -1.68
LIMA1-214ENST00000552783 ANAPC1Q9H1A4 1944 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.55□□□□□ -1.68
LIMA1-214ENST00000552783 FAAHO00519 579 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 MAGEB4O15481 346 aaPredicted RBP4.55□□□□□ -1.68
LIMA1-214ENST00000552783 PTHLHP12272 177 aa4.55□□□□□ -1.68
LIMA1-214ENST00000552783 ANXA3P12429 323 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms