RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	FIGNL1	Q6PIW4	674 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	OVCH1	Q7RTY7	1134 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	HMGN2P46	Q86SG4	172 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	RBM45	Q8IUH3	476 aa	Known RBP	11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	PRSS58	Q8IYP2	241 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	SLC2A12	Q8TD20	617 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	GIPC3	Q8TF64	312 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	CYGB	Q8WWM9	190 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	NR4A3	Q92570	626 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	DAZL	Q92904	295 aa	Known RBP	11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	GATA6	Q92908	595 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	ZG16B	Q96DA0	208 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	RNF31	Q96EP0	1072 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	RMND5B	Q96G75	393 aa	Predicted RBP	11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	SLC46A1	Q96NT5	459 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	CTRC	Q99895	268 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	ITPA	Q9BY32	194 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	SLC26A1	Q9H2B4	701 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	TOR3A	Q9H497	397 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	EVA1A	Q9H8M9	152 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	ACER3	Q9NUN7	267 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	KIF17	Q9P2E2	1029 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	C3orf18	Q9UK00	162 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	CLCA3P	Q9Y6N3	262 aa		11.78	□□□□□ -0.52
CACNB3-223	ENST00000552480	BDP1	A6H8Y1	2624 aa		11.77	□□□□□ -0.52
CACNB3-223	ENST00000552480	ARRDC5	A6NEK1	342 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	VSTM2B	A6NLU5	285 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	TMX2-CTNND1	H3BSU7	103 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	FFAR1	O14842	300 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	CCNB2	O95067	398 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	HEXB	P07686	556 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	UBTFL6	P0CB48	400 aa	Predicted RBP	11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	CT45A8	P0DMV1	189 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	CT45A9	P0DMV2	189 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	CCL4	P13236	92 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	IL7R	P16871	459 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	CDH2	P19022	906 aa	Predicted RBP	11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	AGXT	P21549	392 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	CHN2	P52757	468 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	EEF1A1	P68104	462 aa	Known RBP	11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	GANAB	Q14697	944 aa	Known RBP	11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	LAPTM4A	Q15012	233 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	NPTX1	Q15818	432 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	CT45A2	Q5DJT8	189 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	COLEC12	Q5KU26	742 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	RNF220	Q5VTB9	566 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	ANKRD34A	Q69YU3	496 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	UGT2A3	Q6UWM9	527 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF836	Q6ZNA1	936 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	LAPTM4B	Q86VI4	370 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	TAGAP	Q8N103	731 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	MORN4	Q8NDC4	146 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	PIK3C3	Q8NEB9	887 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	OR10G2	Q8NGC3	310 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	OR6T1	Q8NGN1	323 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF721	Q8TF20	911 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	PHF10	Q8WUB8	498 aa	Known RBP	11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	PRRC1	Q96M27	445 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	LRFN5	Q96NI6	719 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	MBOAT4	Q96T53	435 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	CMKLR1	Q99788	373 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	PRRX2	Q99811	253 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	WFDC6	Q9BQY6	131 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	G6PC3	Q9BUM1	346 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	STRADB	Q9C0K7	418 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	OR8D2	Q9GZM6	311 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	FBXO34	Q9NWN3	711 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	SLC39A1	Q9NY26	324 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	UBAP1	Q9NZ09	502 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	CBLC	Q9ULV8	474 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	GPR55	Q9Y2T6	319 aa	Predicted RBP	11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	CHST2	Q9Y4C5	530 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	PCDHGA10	Q9Y5H3	936 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	DNAH14	Q0VDD8	3507 aa		11.77	□□□□□ -0.53
CACNB3-223	ENST00000552480	OR6C76	A6NM76	312 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	IDS	B3KWA1	339 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	MEN1	O00255	615 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	SEMA7A	O75326	666 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	ALOX12B	O75342	701 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	UGT2B17	O75795	530 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	IGKV1D-16	P01601	117 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	H1F0	P07305	194 aa	Known RBP	11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	LYN	P07948	512 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	ITGAM	P11215	1152 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	ANXA8	P13928	327 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	NID1	P14543	1247 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	PIGA	P37287	484 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	PPIC	P45877	212 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	PSMD4	P55036	377 aa	Known RBP	11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	DCAF7	P61962	342 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	TCF15	Q12870	199 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	MAPK14	Q16539	360 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZIK1	Q3SY52	487 aa	Predicted RBP	11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	FLYWCH1	Q4VC44	716 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	CDCP2	Q5VXM1	449 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	TTC23	Q5W5X9	447 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	SHISA6	Q6ZSJ9	500 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	LANCL3	Q6ZV70	420 aa		11.76	□□□□□ -0.53
CACNB3-223	ENST00000552480	USP51	Q70EK9	711 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms