RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 TPOP07202 933 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 ACP2P11117 423 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 ESRRAP11474 423 aaPredicted RBP16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 CYP4B1P13584 511 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 CA7P43166 264 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 MAN2A2P49641 1150 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 CLK3P49761 638 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 STX1BP61266 288 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 SRSF1Q07955 248 aaKnown RBP eCLIP16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 C3AR1Q16581 482 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 PDCD4Q53EL6 469 aaKnown RBP16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 EPGNQ6UW88 154 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 ANKRD46Q86W74 232 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 CLECL1Q8IZS7 167 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 EID3Q8N140 333 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 GLB1L3Q8NCI6 653 aaPredicted RBP16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 OR5AK3PQ8NH89 298 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 PIK3R3Q92569 461 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 ACTRT3Q9BYD9 372 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 GALNT9Q9HCQ5 603 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 MED4Q9NPJ6 270 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 PLSCR2Q9NRY7 297 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 TINAGQ9UJW2 476 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 LRRK2Q5S007 2527 aa16.91■□□□□ 0.3
PRPF40B-216ENST00000552301 TRGV5A0A0B4J1U4 118 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 RNF103-CHMP3A0A140T963 221 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 GXYLT2A0PJZ3 443 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 CCL21O00585 134 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 SNPHO15079 494 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 SCO2O43819 266 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 IGHG3P01860 377 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 CELA3AP09093 270 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 RFPL3SP0C7P2 107 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 EVI2BP34910 448 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 AQP5P55064 265 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 WNT3P56703 355 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 DUSP5Q16690 384 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 TIGD3Q6B0B8 471 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 MTFR2Q6P444 385 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 Q6ZPB1 254 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 TRILQ7L0X0 811 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 SLC16A11Q8NCK7 471 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 ADAMTS15Q8TE58 950 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 HOXB13Q92826 284 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 OTUB1Q96FW1 271 aaPredicted RBP16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 C16orf58Q96GQ5 468 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 STACQ99469 402 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 ZIM2Q9NZV7 527 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 ABCG2Q9UNQ0 655 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 ZNF835Q9Y2P0 537 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 C15orf41Q9Y2V0 281 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 WIF1Q9Y5W5 379 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 LIPGQ9Y5X9 500 aa16.9■□□□□ 0.3
PRPF40B-216ENST00000552301 C9JVG2 144 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 HCN1O60741 890 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 SLC22A3O75751 556 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 SOX30O94993 753 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 GCKP35557 465 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 PTGDSP41222 190 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 POU6F2P78424 691 aaPredicted RBP16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 CDC73Q6P1J9 531 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 MYO7BQ6PIF6 2116 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 CD163Q86VB7 1156 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 MIER2Q8N344 545 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 FAM57AQ8TBR7 257 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 RELTQ969Z4 430 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 SARAFQ96BY9 339 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 SLC35G5Q96KT7 338 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 TEX37Q96LM6 180 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 GNRHR2Q96P88 292 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 OR52E6Q96RD3 313 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 DUSP22Q9NRW4 184 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 PCDHGB3Q9Y5G1 929 aa16.89■□□□□ 0.29
PRPF40B-216ENST00000552301 C2orf72A6NCS6 295 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 OR14I1A6ND48 311 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 NPIPA2E9PIF3 369 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 NPIPA3F8WFD2 350 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 AQP7O14520 342 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 ZNHIT1O43257 154 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 SUSD5O60279 629 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 PGRP06401 933 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 ATP6V1C1P21283 382 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 MAP3K8P41279 467 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 TRPC1P48995 793 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 IDH3AP50213 366 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 DGKQP52824 942 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 LRRC74AQ0VAA2 488 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 FIGNL1Q6PIW4 674 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 TRIML2Q8N7C3 387 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 OR4K17Q8NGC6 315 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 CDS1Q92903 461 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 G6PC3Q9BUM1 346 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 CCDC28BQ9BUN5 200 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 BTBD2Q9BX70 525 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 TBL1XR1Q9BZK7 514 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 SLC6A15Q9H2J7 730 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 PIGUQ9H490 435 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 ACKR4Q9NPB9 350 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 SERHLQ9NQF3 203 aa16.88■□□□□ 0.29
PRPF40B-216ENST00000552301 SDR39U1Q9NRG7 319 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms