RNA–Protein interactions for RNA: ENST00000551242.5

ERBB3-219, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,755 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-219ENST00000551242 PCDHB16Q9NRJ7 776 aa11.5□□□□□ -0.57
ERBB3-219ENST00000551242 ACAD8Q9UKU7 415 aa11.5□□□□□ -0.57
ERBB3-219ENST00000551242 ZNF175Q9Y473 711 aa11.5□□□□□ -0.57
ERBB3-219ENST00000551242 PDE4DIPQ5VU43 2346 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 TP53BP1Q12888 1972 aaPredicted RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 A0A1W2PRQ8 180 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 B4GALT2O60909 372 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 TFP02787 698 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 ATP1B2P14415 290 aaPredicted RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 UQCRC2P22695 453 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 PTSQ03393 145 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 HSPB3Q12988 150 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 ETFDHQ16134 617 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 SYPL1Q16563 259 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 SFXN4Q6P4A7 337 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 SMARCD3Q6STE5 483 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 OVCH2Q7RTZ1 564 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 DGLUCYQ7Z3D6 616 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 UBE2Q1Q7Z7E8 422 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 OR6T1Q8NGN1 323 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 THAP4Q8WY91 577 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 DMRTA2Q96SC8 542 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 TMEM168Q9H0V1 697 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 SYNDIG1Q9H7V2 258 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 KLHL42Q9P2K6 505 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 GMEB2Q9UKD1 530 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 CHST2Q9Y4C5 530 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 MKI67P46013 3256 aaKnown RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 IRGMA1A4Y4 181 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 SLC38A8A6NNN8 435 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 A8MXK9 166 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 PDCD5O14737 125 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 RNF13O43567 381 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 SLC28A2O43868 658 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 KCNJ13O60928 360 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 RGS9O75916 674 aaPredicted RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 SLC2A10O95528 541 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 APOC3P02656 99 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 ACP5P13686 325 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 PTNP21246 168 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 ATP5A1P25705 553 aaKnown RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 IMPA1P29218 277 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 CBX5P45973 191 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 PYHIN1Q6K0P9 492 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 ZNF322Q6U7Q0 402 aaPredicted RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 FAM198BQ6UWH4 519 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 SLCO4C1Q6ZQN7 724 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 FGD2Q7Z6J4 655 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 IZUMO1Q8IYV9 350 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 CBARPQ8N350 705 aaPredicted RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 POGLUT1Q8NBL1 392 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 UXS1Q8NBZ7 420 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 MORN4Q8NDC4 146 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 HMGB4Q8WW32 186 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 ZFPM2Q8WW38 1151 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 CNOT9Q92600 299 aaKnown RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 FCRL4Q96PJ5 515 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 TREX2Q9BQ50 279 aaPredicted RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 DDX31Q9H8H2 851 aaKnown RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 KCNK12Q9HB15 430 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 ASB6Q9NWX5 421 aa11.49□□□□□ -0.57
ERBB3-219ENST00000551242 ZMAT5Q9UDW3 170 aaKnown RBP11.49□□□□□ -0.57
ERBB3-219ENST00000551242 PLXNB3Q9ULL4 1909 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 VWA8A3KMH1 1905 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 FAM183AA6NL82 134 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 KRBOX1C9JBD0 128 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 L7N2F9 121 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 SLC16A5O15375 505 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 UBXN7O94888 489 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 MTNR1BP49286 362 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 ARHGDIBP52566 201 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 SMIM11AP58511 58 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 SNTB2Q13425 540 aaKnown RBP11.48□□□□□ -0.57
ERBB3-219ENST00000551242 SLBPQ14493 270 aaKnown RBP eCLIP11.48□□□□□ -0.57
ERBB3-219ENST00000551242 C1orf94Q6P1W5 598 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 BTN2A1Q7KYR7 527 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 SYT9Q86SS6 491 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 ZNF740Q8NDX6 193 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 OR4D9Q8NGE8 314 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 OR5D16Q8NGK9 328 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 SCAMP4Q969E2 229 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 USB1Q9BQ65 265 aaKnown RBP11.48□□□□□ -0.57
ERBB3-219ENST00000551242 GPR62Q9BZJ7 368 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 ZCCHC4Q9H5U6 513 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 CA10Q9NS85 328 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 TDP1Q9NUW8 608 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 NPTNQ9Y639 398 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 CSNK1G3Q9Y6M4 447 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 ZC3H12DA2A288 527 aaKnown RBP11.48□□□□□ -0.57
ERBB3-219ENST00000551242 PRAMEF27A3QJZ7 478 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 KDM4EB2RXH2 506 aaPredicted RBP11.48□□□□□ -0.57
ERBB3-219ENST00000551242 CHURC1-FNTBB4DL54 471 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 HMGN4O00479 90 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 CHST10O43529 356 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 CBX7O95931 251 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 XPAP23025 273 aaPredicted RBP11.48□□□□□ -0.57
ERBB3-219ENST00000551242 RPL35P42766 123 aaKnown RBP11.48□□□□□ -0.57
ERBB3-219ENST00000551242 MAPK9P45984 424 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 VEGFCP49767 419 aa11.48□□□□□ -0.57
ERBB3-219ENST00000551242 AKR1D1P51857 326 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms